12 datasets found
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Federal
Drinking Water Microbiome Sequence Data Set
U.S. Environmental Protection Agency —
The fasta file (BM_OTU.fasta) contain the sequences of the bacterial 16S rRNA-encoding V4 region gene (≈250 nt) for each Operational Taxonomic Unit (OTU). This... -
Federal
Microbial Community Analysis based on 16S rRNA gene of Sediment Layers
U.S. Environmental Protection Agency —
A table (DP_OTU.xlsx) contains rows as OTUs, columns as samples, and entries representing the abundance of each OTU. This dataset is associated with the following... -
Federal
Drinking Water Microbiome OTU Abundance Data Set
U.S. Environmental Protection Agency —
An abundance matrix (BM_OTU.xlsx) contains rows as OTU, columns as samples, and entries representing the abundance of each OTU as a ratio of all sequences obtained... -
Federal
Data from: Evaluating impacts of radiation-induced sterilization on the performance and gut microbiome of mass-reared Mediterranean fruit fly (Ceratitis capitata) in Hawai’i
Department of Agriculture —
Mediterranean fruit fly males reared for sterile insect technique (SIT) have been shown to have differences in their microbiomes relative to other population sources,... -
Federal
Phylogenetic analysis of methanogens from the bovine rumen
U.S. Department of Health & Human Services —
Background Interest in methanogens from ruminants has resulted from the role of methane in global warming and from the fact that cattle typically lose 6 % of ingested... -
Federal
Metropolitan DWDS Sequence Data Set
U.S. Environmental Protection Agency —
PS_GenBank.fasta file contain the sequences of the bacterial 16S rRNA-encoding gene for each representative sequence. The sequence containing four hypervariable... -
Federal
Bacterial discrimination by means of a universal array approach mediated by LDR (ligase detection reaction)
U.S. Department of Health & Human Services —
Background PCR amplification of bacterial 16S rRNA genes provides the most comprehensive and flexible means of sampling bacterial communities. Sequence analysis of... -
Federal
Data from: Full-length 16S rRNA sequencing on target microbe establishment in laboratory and mass-reared Mediterranean fruit fly
Department of Agriculture —
Study aim was to determine establishment success of antibiotic resistance bacteria in laboratory and mass-reared Mediterranean fruit fly (Ceratitis capitata).... -
Federal
Resilience of Microbial Communities Sequence Data Set
U.S. Environmental Protection Agency —
The EX_Genome_Assemblies.zip file contain the contig sequences (i.e. assembly) of fifteen isolates used for genomic and antibiotic resistance genes (ARG) analysis.... -
Federal
Drinking Water Microbiome Taxonomic Lineage Abundance Data Set
U.S. Environmental Protection Agency —
An abundance matrix (BM_taxonomic_lineage.xlsx) contains rows as taxonomic lineage, columns as samples, and entries representing the abundance of each lineage as a... -
Federal
A database for the provisional identification of species using only genotypes: web-based genome profiling
U.S. Department of Health & Human Services —
Background For a long time one could not imagine being able to identify species on the basis of genotype only as there were no technological means to do so. But... -
Federal
EPA-Generated_Data_for_Banerji_et_al._Ecological_Role_of_MC
U.S. Environmental Protection Agency —
Data used to generate Figures 2, 3, and 4 as we ll as Table 3. This dataset is associated with the following publication: Banerji, A., M. Bagley, J. Shoemaker, D....
12 datasets found