9 datasets found
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Federal
CottonGen Map Viewer
Department of Agriculture —
MapViewer is a graphical tool for viewing and comparing Gossypium spp. genetic maps. It includes dynamically scrollable maps, correspondence matrices, dot plots,... -
Federal
CottonGen: Cotton Database Resources
Department of Agriculture —
CottonGen (https://www.cottongen.org) is a curated and integrated web-based relational database providing access to publicly available genomic, genetic and breeding... -
Federal
CottonGen JBrowse
Department of Agriculture —
CottonGen has an instance of the JBrowse genome browser for viewing genome data. A list of the genomes available in CottonGen can be accessed by clicking the JBrowse... -
Federal
CottonGen Synteny Viewer
Department of Agriculture —
Conserved syntenic regions among publicly available cotton genomes were analyzed by CottonGen and made available using the Tripal Synteny Viewer developed by the Fei... -
Federal
CottonGen CottonCyc Pathways Database
Department of Agriculture —
The CottonGen CottonCyc Pathways Database, part of CottonGen, supports searching and browsing the following CottonCyc databases: Cyc pathways for JGI v2.0 G.... -
Federal
CottonGen Sequence Retrieval
Department of Agriculture —
Sequence Retrieval allows users to download nucleotide and protein sequences including chromosomes, scaffolds, genes, mRNAs, transcript coding sequences, protein,... -
Federal
CottonGen Primer3
Department of Agriculture —
Primer3web version 4.0.0 allows users to pick PCR primers from a DNA sequence based on criteria including: oligonucleotide melting temperature, size, GC content, and... -
Federal
CottonGen BLAST
Department of Agriculture —
CottonGen offers BLAST with genome, transcriptome, peptide and marker sequence databases from Gossypium species. This can be done using nucleotide sequences or... -
Federal
CottonGen Breeding Information Management System (BIMS)
Department of Agriculture —
BIMS, the Breeding Information Management System, is a secure and comprehensive online breeding management system developed for the generic Tripal Database Platform...
9 datasets found