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    • CottonGen BLAST

    Metadata Updated: April 21, 2025

    CottonGen offers BLAST with genome, transcriptome, peptide and marker sequence databases from Gossypium species. This can be done using nucleotide sequences or peptide sequences. BLAST functionality is similar to that on NCBI. BLAST Programs:

    blastn: Search a nucleotide database using a nucleotide query. blastx: Search protein database using a translated nucleotide query. tblastn: Search translated nucleotide database using a protein query.

    blastp: Search protein database using a protein query. Resources in this dataset:Resource Title: Website Pointer for CottonGen BLAST Search. File Name: Web Page, url: https://www.cottongen.org/blast CottonGen offers BLAST with genome, transcriptome, peptide and marker sequence databases from Gossypium species. This can be done using nucleotide sequences or peptide sequences. BLAST functionality is similar to that on NCBI. Enter or upload FASTA sequence(s) to query and select BLAST database.

    BLAST Programs:

    blastn: Search a nucleotide database using a nucleotide query. blastx: Search protein database using a translated nucleotide query. tblastn: Search translated nucleotide database using a protein query. blastp: Search protein database using a protein query.

    Access & Use Information

    Public: This dataset is intended for public access and use. License: us-pd

    Downloads & Resources

    Dates

    Metadata Created Date March 30, 2024
    Metadata Updated Date April 21, 2025

    Metadata Source

    Harvested from USDA JSON

    Other Data Resources

    Additional Metadata

    Resource Type Dataset
    Metadata Created Date March 30, 2024
    Metadata Updated Date April 21, 2025
    Publisher Agricultural Research Service
    Maintainer
    Identifier 10113/AA23030
    Data Last Modified 2024-02-13
    Public Access Level public
    Bureau Code 005:18
    Metadata Context https://project-open-data.cio.gov/v1.1/schema/catalog.jsonld
    Schema Version https://project-open-data.cio.gov/v1.1/schema
    Catalog Describedby https://project-open-data.cio.gov/v1.1/schema/catalog.json
    Harvest Object Id 17eabaee-cc9f-4534-a090-f329c7c5ef4f
    Harvest Source Id d3fafa34-0cb9-48f1-ab1d-5b5fdc783806
    Harvest Source Title USDA JSON
    License https://www.usa.gov/publicdomain/label/1.0/
    Program Code 005:040
    Source Datajson Identifier True
    Source Hash 148af87181b4a50950e6519ac846d21baa3877358ac621170ee560cb47d31b80
    Source Schema Version 1.1

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