Search datasets
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The present study analyzed the microbial communities of a constructed wetlands designed to treat reverse osmosis concentrate generated by an advanced water treatment facility. DNA sequencing and...
Search relevance: 1.00 | Views last month: 8 | Catalog Last Checked: September 10, 2026 at 07:43 PM -
The bacterial 16S tag-encoded FLX-titanium amplicon pyrosequencing (bTEFAP) method was used to carry out the classification analysis of bacterial flora in adult female and male horn flies and horn...
Search relevance: 1.00 | Views last month: 5 | Catalog Last Checked: September 10, 2026 at 07:52 PM -
In US catfish aquaculture, copper sulfate pentahydrate (CSP; CuSO4·5H2O) is used for a wide variety of applications including the control of blue-green algae, pathogenic bacteria, and parasite...
Search relevance: 1.00 | Views last month: 5 | Catalog Last Checked: September 10, 2026 at 07:53 PM -
This repository contains raw and intermediate data files as well as analysis code from the manuscript "Evaluating the Analytical Performance of Direct-to-Consumer Gut Microbiome Testing Services"....
Search relevance: 1.00 | Views last month: 4 | Catalog Last Checked: September 10, 2026 at 05:53 PM -
The fasta file (BM_OTU.fasta) contain the sequences of the bacterial 16S rRNA-encoding V4 region gene (≈250 nt) for each Operational Taxonomic Unit (OTU). This dataset is associated with the...
Search relevance: 1.00 | Views last month: 4 | Catalog Last Checked: September 10, 2026 at 06:57 PM -
Sustainable culture of sablefish (Anoplopoma fimbria) is an active research area at NWFSC, with a primary objective of rearing a human food source under healthy, economic, and sustainable...
Search relevance: 1.00 | Views last month: 3 | Catalog Last Checked: August 03, 2026 at 04:03 AM -
Experiments tested if changes in soil microbiomes within reconstructed freshwater wetlands were associated with exposure to elevated Cu concentrations originating from immersed Micronized Copper...
Search relevance: 1.00 | Views last month: 3 | Catalog Last Checked: September 10, 2026 at 06:58 PM -
Species- and sex-related differences of four laboratory tephritid fruit fly (Diptera: Tephritidae) gut microbiomes evaluated with full-length 16S rRNA PacBio Kinnex sequencing. Insect gut...
Search relevance: 1.00 | Views last month: 2 | Catalog Last Checked: September 10, 2026 at 07:49 PM -
A table (DP_KEGG.xlsx) contains rows as KEGG Orthology (KO), columns as sediment layers, and entries representing the abundance of each KO. This dataset is associated with the following...
Search relevance: 1.00 | Views last month: 2 | Catalog Last Checked: September 10, 2026 at 06:57 PM -
Effects of developmental 17beta-estradiol exposure on microbiota and behavior in zebrafish. This dataset is associated with the following publication: Catron, T., A. Swank, L. Wehmas, D. Phelps,...
Search relevance: 1.00 | Views last month: 2 | Catalog Last Checked: September 10, 2026 at 06:55 PM -
Data used to generate figures shown in Phelps et al. This dataset is associated with the following publication: Phelps, D., N. Brinkman, S. Keely, E. Anneken, T. Catron, D. Betancourt, C. Wood,...
Search relevance: 1.00 | Views last month: 2 | Catalog Last Checked: September 10, 2026 at 06:53 PM -
A table (DP_OTU.xlsx) contains rows as OTUs, columns as samples, and entries representing the abundance of each OTU. This dataset is associated with the following publication: Gomez-Alvarez, V.,...
Search relevance: 1.00 | Views last month: 2 | Catalog Last Checked: September 10, 2026 at 06:57 PM -
Microbiome analyses. This dataset is associated with the following publication: Griggs, J., L. Chi, N. Hanley, M. Kohan, K. Herbin-Davis, D. Thomas, K. Lu, R. Fry, and K. Bradham....
Search relevance: 1.00 | Views last month: 2 | Catalog Last Checked: September 10, 2026 at 06:59 PM -
This provides taxonomic data (as relative abundances) derived from metagenomic sequencing of greywater samples. This dataset is associated with the following publication: Nagarkar, M., S. Keely,...
Search relevance: 1.00 | Views last month: 2 | Catalog Last Checked: September 10, 2026 at 06:58 PM -
The objective of this study was to explore the R. microplus microbiome by applying the bacterial 16S tag-encoded FLX-titanium amplicon pyrosequencing (bTEFAP) technique to characterize its...
Search relevance: 1.00 | Views last month: 2 | Catalog Last Checked: September 10, 2026 at 07:49 PM -
An ex vivo study of the effects on the human gut microbiota of the food additive butylated hydroxyanisole (BHA) at a concentration of 0.35 g/L. Incubations were performed on fecal slurries from 24...
Search relevance: 1.00 | Views last month: 2 | Catalog Last Checked: September 10, 2026 at 07:48 PM -
Mediterranean fruit fly males reared for sterile insect technique (SIT) have been shown to have differences in their microbiomes relative to other population sources, which has been postulated to...
Search relevance: 1.00 | Views last month: 2 | Catalog Last Checked: September 10, 2026 at 07:48 PM -
This data release includes sampling location data, the information about sequenced organisms and the SRA accession number for the 16S whole-organism sequencing data for larval aquatic insects,...
Search relevance: 1.00 | Views last month: 2 | Catalog Last Checked: September 10, 2026 at 08:07 PM -
A table (DP_SRA.xlsx) contains rows as sample and columns as entries representing the biosample accession number (NCBI), collection (date), library strategy, target (source), and sequencing...
Search relevance: 1.00 | Views last month: 2 | Catalog Last Checked: September 10, 2026 at 06:57 PM -
This repository provides the raw data, analysis code, and results generated during a systematic evaluation of the impact of selected experimental protocol choices on the metagenomic sequencing...
Search relevance: 1.00 | Views last month: 2 | Catalog Last Checked: September 10, 2026 at 05:52 PM
