Data from: Impact of larval food source on the stability of the <i>Bactrocera dorsalis </i>microbiome
Resources
10 resources available
-
Control Processing and Check.zip
ZIP -
Processing and Main Output.zip
ZIP -
VkMetaData.csv
CSV -
Vkrarefy.csv
CSV -
OccAbunCore.tsv
TSV -
SloanNeutralModeling_VK.R
R -
IndividualOTUKWtest_VK.R
R -
NMDSandADONIScode.R
R -
AlphaDiversity_VK.R
R -
RelativeAbundancePlots_VK.R
R
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Complete Metadata
| @type | dcat:Dataset |
|---|---|
| accessLevel | public |
| bureauCode |
[ "005:18" ] |
| contactPoint |
{ "fn": "Mason, Charles", "hasEmail": "mailto:charles.mason@usda.gov" } |
| description | <p dir="ltr">We conducted a fly rearing experiment to characterize diet-induced changes in the microbiome of female <i>Bactrocera dorsalis</i>. In order to explicitly investigate the impacts of larval diet on the microbiome, including potential stable bacterial constituents of <i>B. dorsalis</i>, we performed 16S rRNA sequencing on the gut tissues of teneral female flies reared from 4 different host fruits (guava, mango, papaya, and rose-apple) infested using a single cohort of wild <i>B. dorsalis</i> that emerged from tropical almond (mother flies). We provide processed data and R code for our analysis.</p><p dir="ltr">Raw data (.fastq files) for analysis are located at NCBI SRA under accession number PRJNA1061202</p> |
| distribution |
[ { "@type": "dcat:Distribution", "title": "Control Processing and Check.zip", "format": "zip", "mediaType": "application/zip", "downloadURL": "https://ndownloader.figshare.com/files/43971576" }, { "@type": "dcat:Distribution", "title": "Processing and Main Output.zip", "format": "zip", "mediaType": "application/zip", "downloadURL": "https://ndownloader.figshare.com/files/43971600" }, { "@type": "dcat:Distribution", "title": "VkMetaData.csv", "format": "csv", "mediaType": "text/plain", "downloadURL": "https://ndownloader.figshare.com/files/43971603" }, { "@type": "dcat:Distribution", "title": "Vkrarefy.csv", "format": "csv", "mediaType": "text/plain", "downloadURL": "https://ndownloader.figshare.com/files/43971606" }, { "@type": "dcat:Distribution", "title": "OccAbunCore.tsv", "format": "tsv", "mediaType": "text/plain", "downloadURL": "https://ndownloader.figshare.com/files/43971609" }, { "@type": "dcat:Distribution", "title": "SloanNeutralModeling_VK.R", "format": "R", "mediaType": "text/plain", "downloadURL": "https://ndownloader.figshare.com/files/43971615" }, { "@type": "dcat:Distribution", "title": "IndividualOTUKWtest_VK.R", "format": "R", "mediaType": "text/plain", "downloadURL": "https://ndownloader.figshare.com/files/43971681" }, { "@type": "dcat:Distribution", "title": "NMDSandADONIScode.R", "format": "R", "mediaType": "text/plain", "downloadURL": "https://ndownloader.figshare.com/files/43971684" }, { "@type": "dcat:Distribution", "title": "AlphaDiversity_VK.R", "format": "R", "mediaType": "text/plain", "downloadURL": "https://ndownloader.figshare.com/files/43971687" }, { "@type": "dcat:Distribution", "title": "RelativeAbundancePlots_VK.R", "format": "R", "mediaType": "text/plain", "downloadURL": "https://ndownloader.figshare.com/files/43971690" } ] |
| identifier | 10.15482/USDA.ADC/24969123.v1 |
| keyword |
[ "16S amplicon analysis code", "gut", "insect", "microbiome", "reproduction" ] |
| license | https://creativecommons.org/licenses/by/4.0/ |
| modified | 2026-05-27 |
| programCode |
[ "005:040" ] |
| publisher |
{ "name": "Agricultural Research Service", "@type": "org:Organization" } |
| temporal | 2022-07-01/1022-09-30 |
| title | Data from: Impact of larval food source on the stability of the <i>Bactrocera dorsalis </i>microbiome |
