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Immigration and cyclical bottlenecks: High inbreeding despite high genetic diversity in an oscillating population of the biting midge, Culicoides sonorensis (Diptera: Ceratopogonidae)

Metadata Updated: March 30, 2024

These data represent the microsatellite peak calls generated after genotyping the specimens, as well as, the outputs from downstream analyses and the metadata used to construct some of the figures and tables. The microsatellite data can be found in "Shults_2023_peak_calls.xlsx" and contains the identity of each peak scored scored using Geneious v.9.1 software. An "x" represents no peak call at that marker for that individual. These data were used as input for all of the subsequent population genetic analyses. All of the data used to create the tables and figures of the manuscript can be found in "Shults_2023_tables_figs.xlsx". Resources in this dataset:

Resource Title: Microsatellite peak calls File Name: Shults_2023_peak_calls.xlsx Resource Description: Contained in this file are all of the individual specimens (rows) genotype during this project. An "x" represents an uncalled peak for that specific marker.

Resource Title: Tables and Figures File Name: Shults_2023_tables_figs.xlsx Resource Description: Contained in this file are all of the metadata used to create the tales and figures from the manuscript. Each tab is labeled with the corresponding information and IBT stands for isolation by time.

Access & Use Information

Public: This dataset is intended for public access and use. License: us-pd

Downloads & Resources

Dates

Metadata Created Date March 30, 2024
Metadata Updated Date March 30, 2024

Metadata Source

Harvested from USDA JSON

Additional Metadata

Resource Type Dataset
Metadata Created Date March 30, 2024
Metadata Updated Date March 30, 2024
Publisher Agricultural Research Service
Maintainer
Identifier 10.15482/USDA.ADC/1528959
Data Last Modified 2023-11-30
Public Access Level public
Bureau Code 005:18
Metadata Context https://project-open-data.cio.gov/v1.1/schema/catalog.jsonld
Schema Version https://project-open-data.cio.gov/v1.1/schema
Catalog Describedby https://project-open-data.cio.gov/v1.1/schema/catalog.json
Harvest Object Id 3ace0ec7-967b-469e-af83-c37ab3aeb5ca
Harvest Source Id d3fafa34-0cb9-48f1-ab1d-5b5fdc783806
Harvest Source Title USDA JSON
License https://www.usa.gov/publicdomain/label/1.0/
Old Spatial {"type": "Polygon", "coordinates": -117.7473449707, 33.861114931205, -117.7473449707, 34.182092230007, -117.05795288086, 34.182092230007, -117.05795288086, 33.861114931205, -117.7473449707, 33.861114931205}
Program Code 005:040
Source Datajson Identifier True
Source Hash 52346a1b436767bea0240df7fd9d2d9b736914efff6b42458356fb03c2c9fa7c
Source Schema Version 1.1
Spatial {"type": "Polygon", "coordinates": -117.7473449707, 33.861114931205, -117.7473449707, 34.182092230007, -117.05795288086, 34.182092230007, -117.05795288086, 33.861114931205, -117.7473449707, 33.861114931205}

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