Data from: Metagenomes and Metagenome-Assembled Genomes from Ex Vivo Fecal Incubations of Six Unique Donors
This is a dataset consisting of donor-specific collections of 78 metagenomes (13 / donor) and 143 metagenome-assembled genomes (MAGs) representing the gut microbiomes of six healthy adult human donors. Raw sequencing data and MAG sequence data will be available in NCBI under BioProject accession PRJNA961974 (https://www.ncbi.nlm.nih.gov/bioproject/PRJNA961974). Spreadsheets attached to this dataset include individual accession numbers and sequencing depth for the raw data; and assembly and NCBI accession numbers, binning information, quality metrics, and taxonomic assignments for the MAGs.Resources in this dataset:Resource Title: Metagenome assembled genome (MAG) information File Name: MAGs_information_table.csvResource Title: Metagenome sample information File Name: Metagenomes_information_table.csvResource Title: Metagenome metadata table File Name: Metagenome_metadata_table.xlsxResource Title: MAG metadata table File Name: MAG_metadata_table.xlsx
Resources
4 resources available
-
MAGs_information_table_0.csv
CSV -
Metagenomes_information_table.csv
CSV -
MAG_metadata_table.xlsx
XLSX -
Metagenome_metadata_table.xlsx
XLSX
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Complete Metadata
| @type | dcat:Dataset |
|---|---|
| accessLevel | public |
| bureauCode |
[ "005:18" ] |
| contactPoint |
{ "fn": "Narrowe, Adrienne", "hasEmail": "mailto:adrienne.narrowe@usda.gov" } |
| description | <p dir="ltr">This is a dataset consisting of donor-specific collections of 78 metagenomes (13 / donor) and 143 metagenome-assembled genomes (MAGs) representing the gut microbiomes of six healthy adult human donors. Raw sequencing data and MAG sequence data will be available in NCBI under BioProject accession PRJNA961974 (<a href="https://www.ncbi.nlm.nih.gov/bioproject/PRJNA961974">https://www.ncbi.nlm.nih.gov/bioproject/PRJNA961974</a>). Spreadsheets attached to this dataset include individual accession numbers and sequencing depth for the raw data; and assembly and NCBI accession numbers, binning information, quality metrics, and taxonomic assignments for the MAGs.</p><p dir="ltr">Resources in this dataset:</p><ul><li>Resource Title: Metagenome assembled genome (MAG) information File Name: MAGs_information_table.csv</li><li>Resource Title: Metagenome sample information File Name: Metagenomes_information_table.csv</li><li>Resource Title: Metagenome metadata table File Name: Metagenome_metadata_table.xlsx</li><li>Resource Title: MAG metadata table File Name: MAG_metadata_table.xlsx</li></ul><p></p> |
| distribution |
[ { "@type": "dcat:Distribution", "title": "MAGs_information_table_0.csv", "format": "csv", "mediaType": "text/plain", "downloadURL": "https://ndownloader.figshare.com/files/43375644" }, { "@type": "dcat:Distribution", "title": "Metagenomes_information_table.csv", "format": "csv", "mediaType": "text/plain", "downloadURL": "https://ndownloader.figshare.com/files/43375647" }, { "@type": "dcat:Distribution", "title": "MAG_metadata_table.xlsx", "format": "xlsx", "mediaType": "application/vnd.openxmlformats-officedocument.spreadsheetml.sheet", "downloadURL": "https://ndownloader.figshare.com/files/43423635" }, { "@type": "dcat:Distribution", "title": "Metagenome_metadata_table.xlsx", "format": "xlsx", "mediaType": "application/vnd.openxmlformats-officedocument.spreadsheetml.sheet", "downloadURL": "https://ndownloader.figshare.com/files/43423638" } ] |
| identifier | 10.15482/USDA.ADC/1529438 |
| keyword |
[ "ARS", "NP306", "data.gov", "gut microbiome", "metagenome assembled genomes", "metagenomics" ] |
| license | https://www.usa.gov/publicdomain/label/1.0/ |
| modified | 2025-11-21 |
| programCode |
[ "005:040" ] |
| publisher |
{ "name": "Agricultural Research Service", "@type": "org:Organization" } |
| spatial |
"{"type": "MultiPoint", "coordinates": [[-75.171203613281, 39.959999661031], [3.7236785888672, 51.052560082502]]}"
|
| temporal | 2022-05-01/2022-05-01 |
| title | Data from: Metagenomes and Metagenome-Assembled Genomes from Ex Vivo Fecal Incubations of Six Unique Donors |
