Skip to main content
U.S. flag

An official website of the United States government

Official websites use .gov
A .gov website belongs to an official government organization in the United States.

Secure .gov websites use HTTPS
A lock ( ) or https:// means you’ve safely connected to the .gov website. Share sensitive information only on official, secure websites.

Skip to content

Data From: Habitat type and host grazing regimen influence the soil microbial diversity and communities within potential biting midge larval habitats

Metadata Updated: March 30, 2024

Culicoides biting midges are important vectors of diverse microbes such as viruses, protozoa, and nematodes that cause diseases in wild and domestic animals. However, little is known about the role of microbial communities in midge larval habitat utilization in the wild. In this study, we characterized microbial communities (bacterial, protistan, fungal and metazoan) in soils from disturbed (bison and cattle grazed) and undisturbed (non-grazed) pond and spring potential midge larval habitats. We evaluated the influence of habitat and grazing disturbance and their interaction on microbial communities, diversity, presence of midges, and soil properties. These data can be used to better understand environmental microbial communities in tallgrass prairie ecosystems associated with grazed versus ungrazed pond and spring habitats and to draw inferences on the interactions of these communities and soil properties with the presence of biting midge larvae. These data should not be used to make inferences for ecosystems other than tallgrass prairie, for animal management methods other than open cow-calf or bison grazing (such as feedlots, dairies, or stockyards), or for other grazing mammals (such as sheep or goats). These data were collected between the months of September and December and therefore are not representative of microbial communities present from January through August. Abbreviations used include Total Carbon (TC), Total Nitrogen (TN), Organic Matter (OM), Konza Prairie Biological Station (KPBS), Operational Taxonomic Unit (OTU), Principal Coordinates Analysis (PCoA), ribosomal RNA (rRNA), and vesicular stomatitis virus (VSV). The raw Illumina MiSeq sequence data for this project can be found here: https://www.ncbi.nlm.nih.gov/bioproject/PRJNA862140 Resources in this dataset:

Resource Title: Metadata for Midge Larval Habitat Soil Microbiome File Name: Metadata for NCBI Accession PRJNA862140.xlsx Resource Description: This spreadsheet links the raw sequence reads on NCBI with data on the presence/absence of Culicoides midges and soil chemistry data (% total soil nitrogen, % total soil carbon, and % organic matter).

Access & Use Information

Public: This dataset is intended for public access and use. License: Creative Commons Attribution

Downloads & Resources

Dates

Metadata Created Date March 30, 2024
Metadata Updated Date March 30, 2024

Metadata Source

Harvested from USDA JSON

Additional Metadata

Resource Type Dataset
Metadata Created Date March 30, 2024
Metadata Updated Date March 30, 2024
Publisher Agricultural Research Service
Maintainer
Identifier 10.15482/USDA.ADC/1528782
Data Last Modified 2024-02-21
Public Access Level public
Bureau Code 005:18
Metadata Context https://project-open-data.cio.gov/v1.1/schema/catalog.jsonld
Schema Version https://project-open-data.cio.gov/v1.1/schema
Catalog Describedby https://project-open-data.cio.gov/v1.1/schema/catalog.json
Harvest Object Id 9c99b813-7500-48ae-9213-3e2b3e8ba50d
Harvest Source Id d3fafa34-0cb9-48f1-ab1d-5b5fdc783806
Harvest Source Title USDA JSON
License https://creativecommons.org/licenses/by/4.0/
Old Spatial {"type": "Polygon", "coordinates": -96.609477996826, 39.109633808188, -96.608791351318, 39.073127836213, -96.537380218506, 39.07392743942, -96.539783477783, 39.126414882492, -96.539783477783, 39.136534867789, -96.548023223877, 39.13600227324, -96.548366546631, 39.115760695362, -96.567249298096, 39.115760695362, -96.567249298096, 39.112031349217, -96.575145721436, 39.113096896827, -96.575489044189, 39.109101010216, -96.586818695068, 39.109633808188, -96.584758758545, 39.11549432004, -96.590938568115, 39.11362966459, -96.597805023193, 39.113896046961, -96.597461700439, 39.108568208217, -96.609477996826, 39.109633808188}
Program Code 005:040
Source Datajson Identifier True
Source Hash 2baec671ae4fb30d286f033b52d9f199c88d2afec09f358be12e2281b29a6946
Source Schema Version 1.1
Spatial {"type": "Polygon", "coordinates": -96.609477996826, 39.109633808188, -96.608791351318, 39.073127836213, -96.537380218506, 39.07392743942, -96.539783477783, 39.126414882492, -96.539783477783, 39.136534867789, -96.548023223877, 39.13600227324, -96.548366546631, 39.115760695362, -96.567249298096, 39.115760695362, -96.567249298096, 39.112031349217, -96.575145721436, 39.113096896827, -96.575489044189, 39.109101010216, -96.586818695068, 39.109633808188, -96.584758758545, 39.11549432004, -96.590938568115, 39.11362966459, -96.597805023193, 39.113896046961, -96.597461700439, 39.108568208217, -96.609477996826, 39.109633808188}

Didn't find what you're looking for? Suggest a dataset here.