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    • Data from: BBGD: an online database for blueberry genomic data

    Metadata Updated: May 8, 2025

    This dataset is supplemental to the article "BBGD: an online database for blueberry genomic data," (2007); it is titled "list of genes printed on microarray slides." The article, "BBGD: an online database for blueberry genomic data," (2007) involving blueberry cold hardiness experiments has a list of all the genes that were printed on microarray slides. This dataset, supplemental to the article, is called: "list of genes printed on microarray slides." 1471-2229-7-5-s1.xls 663k. By using the BBGD database, researchers developed EST-based markers for mapping, and have identified a number of "candidate" cold tolerance genes that are highly expressed in blueberry flower buds after exposure to low temperatures.

    BBGD (http://bioinformatics.towson.edu/BBGD/) is a public online database, and was developed for blueberry genomics. BBGD is both a sequence and gene expression database: it stores both EST and microarray data, and allows scientists to correlate expression profiles with gene function. Presently, the main focus of the database is the identification of genes in blueberry that are significantly induced or suppressed after low temperature exposure. Data was collected sometime between 2000 and 2007 - exact dates are unknown. Resources in this dataset:Resource Title: List of genes printed on microarray slides, 1471-2229-7-5-s1.xls. File Name: 1471-2229-7-5-s1.xlsResource Title: Data dictionary. File Name: BBGD-data-dictionary.csvResource Description: Defines fields for list of genes.

    Access & Use Information

    Public: This dataset is intended for public access and use. License: Creative Commons Attribution

    Downloads & Resources

    Dates

    Metadata Created Date March 30, 2024
    Metadata Updated Date May 8, 2025

    Metadata Source

    Harvested from USDA JSON

    Other Data Resources

    Additional Metadata

    Resource Type Dataset
    Metadata Created Date March 30, 2024
    Metadata Updated Date May 8, 2025
    Publisher Agricultural Research Service
    Maintainer
    Identifier 10.15482/USDA.ADC/1173243
    Data Last Modified 2025-04-28
    Public Access Level public
    Bureau Code 005:18
    Metadata Context https://project-open-data.cio.gov/v1.1/schema/catalog.jsonld
    Schema Version https://project-open-data.cio.gov/v1.1/schema
    Catalog Describedby https://project-open-data.cio.gov/v1.1/schema/catalog.json
    Harvest Object Id a84779ba-0c61-4ff9-aae6-bffd63f02e19
    Harvest Source Id d3fafa34-0cb9-48f1-ab1d-5b5fdc783806
    Harvest Source Title USDA JSON
    License https://creativecommons.org/licenses/by/4.0/
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    Temporal 2000-01-01/2007-12-31

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