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Angus Sequence Dataset Collection

Metadata Updated: April 21, 2025

Whole genome sequence data for Bovidae Bos taurus - beef Angus, 30 animals in total. The data is in "fastq" format. There are two versions of each file because we did paired end sequencing. There are two reads for each of the 210 data lines (a forward and a reverse read) summing to 420 total. A diagram of this is attached. In the diagram, the two reads would correspond to read 1 and read 3. Resources in this dataset:Resource Title: CSU_136201_SampleSheet.csv - list of all Angus sequence files. File Name: CSU_136201_SampleSheet.csvResource Description: This spreadsheet lists all 210 data files associated with the sequencing of these 30 Angus animals Resource Title: Sequence Reads Diagram. File Name: SequenceReads.pngResource Description: There are two reads for each of the 210 data lines (a forward and a reverse read) summing to 420 total. In the diagram, the two reads would correspond to read 1 and read 3.

Access & Use Information

Public: This dataset is intended for public access and use. License: us-pd

Downloads & Resources

Dates

Metadata Created Date March 30, 2024
Metadata Updated Date April 21, 2025

Metadata Source

Harvested from USDA JSON

Additional Metadata

Resource Type Dataset
Metadata Created Date March 30, 2024
Metadata Updated Date April 21, 2025
Publisher Agricultural Research Service
Maintainer
Identifier 10.15482/USDA.ADC/1529241
Data Last Modified 2024-10-11
Public Access Level public
Bureau Code 005:18
Metadata Context https://project-open-data.cio.gov/v1.1/schema/catalog.jsonld
Schema Version https://project-open-data.cio.gov/v1.1/schema
Catalog Describedby https://project-open-data.cio.gov/v1.1/schema/catalog.json
Harvest Object Id d9ebe5f0-1990-4aff-a7fd-9e8b6014d79a
Harvest Source Id d3fafa34-0cb9-48f1-ab1d-5b5fdc783806
Harvest Source Title USDA JSON
License https://www.usa.gov/publicdomain/label/1.0/
Old Spatial {"type": "Point", "coordinates": -106.56610600168, 41.222307724193}
Program Code 005:040
Source Datajson Identifier True
Source Hash 56b3921619e373f88569de938813e59d4b9613a2e83b9ba24a1bdb4da4b7204d
Source Schema Version 1.1
Spatial {"type": "Point", "coordinates": -106.56610600168, 41.222307724193}
Temporal 2012-01-01/2012-12-31

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