15 datasets found
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Federal
TempO-seq and RNA-seq gene expression levels are highly correlated for most genes: A comparison using 39 human cell lines
U.S. Environmental Protection Agency —
Journal article published in PLOS One, Vol 20, Issue 5, e0320862, 2025; DOI: https://doi.org/10.1371/journal.pone.0320862; PMC12064016. The datasets generated and... -
Federal
Data from: Reference transcriptomics of porcine peripheral immune cells created through bulk and single-cell RNA sequencing
Department of Agriculture —
This dataset contains files reconstructing single-cell data presented in 'Reference transcriptomics of porcine peripheral immune cells created through bulk and... -
Federal
HepRG exposed to microcystin LR and RR gene expression
U.S. Environmental Protection Agency —
RNA-seq data from HepaRG cells exposed for 2 hours to microcystin-LR and -RR at multiple concentrations each. This dataset is associated with the following... -
Federal
Evaluating Whether Oyster Aquaculture Can Help Restore Water Quality - NERRS/NSC(NERRS Science Collaborative)
National Oceanic and Atmospheric Administration, Department of Commerce —
The project team established an experiment that mimicked commercial aquaculture practices and allowed for a robust comparison of nitrogen removal rates from three... -
Federal
Raw data presented in manuscript "The Pollutant Perfluorohexane Sulfonate (PFHxS) Reduces Serum Thyroxine but Does Not Alter Thyroid Hormone Action in the Postnatal Rat Brain" by O'Shaughnessy et al. 2024.
U.S. Environmental Protection Agency —
Raw data to accompanying manuscript "The Pollutant Perfluorohexane Sulfonate (PFHxS) Reduces Serum Thyroxine but Does Not Alter Thyroid Hormone Action in the... -
Federal
O'Shaughnessy et al. 2023
U.S. Environmental Protection Agency —
Data for O'Shaughnessy et al. 2023 - Bypassing the Brain Barriers: Upregulation of Serum miR-495 and miR-543-3p Reflects Thyroid-Mediated Developmental Neurotoxicity... -
Federal
Data from: Condition‐dependent co‐regulation of genomic clusters of virulence factors in the grapevine trunk pathogen Neofusicoccum parvum
Department of Agriculture —
The ascomycete Neofusicoccum parvum, one of the causal agents of Botryosphaeria dieback, is a destructive wood‐infecting fungus and a serious threat to grape... -
Federal
De novo transcriptome assembly and annotations for wheat curl mite (Aceria tosichella)
Department of Agriculture —
To study the impact of wheat streak mosaic virus on global gene expression in wheat curl mite, we generated a de novo transcriptome assembly using 50 x 50 paired end... -
Federal
Conserved B cell signaling, activation, and differentiation in porcine jejunal and ileal Peyer's patches despite distinct immune landscapes
Department of Agriculture —
This dataset contains files used in the manuscript, "Conserved B cell signaling, activation, and differentiation in porcine jejunal and ileal Peyer's patches despite... -
Federal
Host gene expression is associated with viral shedding magnitude in blue-winged teals (Spatula discors) infected with low-path avian influenza virus
U.S. Environmental Protection Agency —
Intraspecific variation in host infectiousness affects disease transmission dynamics in human, domestic animal, and many wildlife host-pathogen systems including... -
Federal
Data for "Thyroid Hormone Action Controls Multiple Components of Cell Junctions at the Ventricular Zone in the Newborn Rat Brain"
U.S. Environmental Protection Agency —
Raw data accompanying "Thyroid Hormone Action Controls Multiple Components of Cell Junctions at the Ventricular Zone in the Newborn Rat Brain". This dataset is... -
Federal
Single-cell RNA sequencing data and resources from blood and milk immune cells of Holstein cattle with chronic mastitis caused by experimental <i>Staphylococcus aureus</i> infection
Department of Agriculture —
This online resource provides supplementary items used to analyze data in the work, "Single-cell RNA sequencing characterization of Holstein cattle blood and milk... -
Federal
Measuring microRNAs in LCM-isolated nephron segments to determine region-specific expression
U.S. Environmental Protection Agency —
To determine nephron specificity of microRNA expression that may be associated as toxicity biomarker seen in the urine, laser-capture microdissection (LCM) was... -
Federal
De novo transcriptome assembly of Schizaphis gramium Biotype I feeding on wheat
Department of Agriculture —
Transcriptome was generated from pooled adult aphids that were fed on wheat plants containing the Dn4 and DN7 resistance gene as well as Yuma plants containing no... -
Federal
Evaluating the impacts of metal exposure concentration and duration on juvenile fish transcriptomes
U.S. Environmental Protection Agency —
Our research used a combination of laboratory-based acute aqueous metals exposures and RNA-sequencing technologies to identify a gene-based means to extrapolate...
15 datasets found