15 datasets found
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Federal
HoloBee Database v2016.1
Department of Agriculture —
Organisms living in honey bees and honey bee colonies form large associative holobiont communities that are integral to bee biology. High-throughput sequencing... -
Federal
Analytical Performance of Direct-to-Consumer Gut Microbiome Testing Services
Department of Commerce —
This repository contains raw and intermediate data files as well as analysis code from the manuscript "Evaluating the Analytical Performance of Direct-to-Consumer Gut... -
Federal
Analytical Performance of Direct-to-Consumer Gut Microbiome Testing Services
National Institute of Standards and Technology —
This repository contains raw and intermediate data files as well as analysis code from the manuscript "Evaluating the Analytical Performance of Direct-to-Consumer Gut... -
Federal
Lake Erie HABs Grab research
U.S. Environmental Protection Agency —
The dataset contains the raw data used for the correlation analyses. This dataset is associated with the following publications: Schaeffer, B., J. SantoDomingo, and... -
Federal
The metagenome sequencing data have been deposited in the European Nucleotide Archive (ENA).
U.S. Environmental Protection Agency —
The raw sequencing data for this study have been deposited in the European Nucleotide Archive (ENA) at EMBL-EBI under accession number PRJEB40814 with the following... -
Federal
Hospital Wastewater AMR Batch Reactor Study (Feb 2020)
U.S. Environmental Protection Agency —
Two sets of triplicate SBRs were operated for ~three months in three-liter glass beakers with an active volume of two liters in a temperature controlled room, as... -
Federal
Environmental DNA and qPCR data for an algal bloom in Kabetogama Lake, northern Minnesota, 2021
Department of the Interior —
This data release provides phytoplankton environmental DNA data and cyanotoxin gene qPCR data from an algal bloom at Ash River Boat Docks on Kabetogama Lake,... -
Federal
Quantitative Metagenomics Benchmarking Experiment Data Set
U.S. Environmental Protection Agency —
To assess the variability of low-abundance oligonucleotide detection across sample matrices, we spiked DNA reference standards (meta sequins) into replicate... -
Federal
MetaCompare 2.0: Data used for pipeline benchmarking and source code
U.S. Environmental Protection Agency —
Dataset includes the SRA accessions of the sequencing data used to benchmark the MetaCompare 2.0 pipeline as well as tables of bacterial taxa and antibiotic... -
Federal
Environmental DNA and qPCR data for an algal bloom in Kabetogama Lake, northern Minnesota, 2023
Department of the Interior —
This data release provides phytoplankton and fish environmental DNA (eDNA) and cyanotoxin biosynthesis gene abundance data from an algal bloom at Ash River Boat Docks... -
Federal
The metagenome sequencing data have been deposited in the European Nucleotide Archive (ENA).
U.S. Environmental Protection Agency —
The raw sequencing data for this study have been deposited in the European Nucleotide Archive (ENA) at EMBL-EBI under accession number PRJEB40814 with the following... -
Federal
Brumfield et al 20xx_Data Set
U.S. Environmental Protection Agency —
Log10 fecal score ratios for eligible microbial source tracking qPCR assays. This dataset is associated with the following publication: Brumfield, K.D., J.A. Cotruvo,... -
Federal
Environmental DNA metabarcoding as a tool for biodiversity assessment and monitoring: Reconstructing established fish communities of north-temperate lakes and rivers
Department of the Interior —
To evaluate the ability of precipitation-based environmental DNA (eDNA) sample collection and mitochondrial 12S metabarcoding sequencing to reconstruct well-studied... -
Federal
Data from: Metagenomes and Metagenome-Assembled Genomes from Ex Vivo Fecal Incubations of Six Unique Donors
Department of Agriculture —
This is a dataset consisting of donor-specific collections of 78 metagenomes (13 / donor) and 143 metagenome-assembled genomes (MAGs) representing the gut microbiomes... -
Federal
Greywater Reuse - Microbial taxa
U.S. Environmental Protection Agency —
This provides taxonomic data (as relative abundances) derived from metagenomic sequencing of greywater samples. This dataset is associated with the following...
15 datasets found