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    • Data from: Metagenomes and Metagenome-Assembled Genomes from Ex Vivo Fecal Incubations of Six Unique Donors

    Metadata Updated: April 21, 2025

    This is a dataset consisting of donor-specific collections of 78 metagenomes (13 / donor) and 143 metagenome-assembled genomes (MAGs) representing the gut microbiomes of six healthy adult human donors. Raw sequencing data and MAG sequence data will be available in NCBI under BioProject accession PRJNA961974 (https://www.ncbi.nlm.nih.gov/bioproject/PRJNA961974). Spreadsheets attached to this dataset include individual accession numbers and sequencing depth for the raw data; and assembly and NCBI accession numbers, binning information, quality metrics, and taxonomic assignments for the MAGs.Resources in this dataset:Resource Title: Metagenome assembled genome (MAG) information File Name: MAGs_information_table.csvResource Title: Metagenome sample information File Name: Metagenomes_information_table.csvResource Title: Metagenome metadata table File Name: Metagenome_metadata_table.xlsxResource Title: MAG metadata table File Name: MAG_metadata_table.xlsx

    Access & Use Information

    Public: This dataset is intended for public access and use. License: us-pd

    Downloads & Resources

    Dates

    Metadata Created Date April 10, 2024
    Metadata Updated Date April 21, 2025

    Metadata Source

    Harvested from USDA JSON

    Other Data Resources

    Additional Metadata

    Resource Type Dataset
    Metadata Created Date April 10, 2024
    Metadata Updated Date April 21, 2025
    Publisher Agricultural Research Service
    Maintainer
    Identifier 10.15482/USDA.ADC/1529438
    Data Last Modified 2024-07-19
    Public Access Level public
    Bureau Code 005:18
    Metadata Context https://project-open-data.cio.gov/v1.1/schema/catalog.jsonld
    Schema Version https://project-open-data.cio.gov/v1.1/schema
    Catalog Describedby https://project-open-data.cio.gov/v1.1/schema/catalog.json
    Harvest Object Id b9e15438-b9f0-4c03-ad30-f8ba5b7f6f81
    Harvest Source Id d3fafa34-0cb9-48f1-ab1d-5b5fdc783806
    Harvest Source Title USDA JSON
    License https://www.usa.gov/publicdomain/label/1.0/
    Old Spatial {"type": "MultiPoint", "coordinates": -75.171203613281, 39.959999661031, 3.7236785888672, 51.052560082502}
    Program Code 005:040
    Source Datajson Identifier True
    Source Hash 224348245ddcfb1c7747def68adbb51278dad9cfbdb4f0ef4e4e1d123470154b
    Source Schema Version 1.1
    Spatial {"type": "MultiPoint", "coordinates": -75.171203613281, 39.959999661031, 3.7236785888672, 51.052560082502}
    Temporal 2022-05-01/2022-05-01

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