80 datasets found
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Federal
The GRIN-Global Project
Department of Agriculture —
GRIN-Global is an ongoing international collaborative project to develop shared and open-source applications that help manage plant germplasm collections. The... -
Federal
Germplasm Resources Information Network (GRIN)
Department of Agriculture —
The Germplasm Resources Information Network (GRIN) is an online portal for information about agricultural genetic resources that are managed by the Agricultural... -
Federal
Sol Genomics Network (SGN)
Department of Agriculture —
The Sol Genomics Network (SGN) is a clade-oriented database dedicated to the biology of the Solanaceae family which includes a large number of closely related and... -
Federal
CottonGen: Cotton Database Resources
Department of Agriculture —
CottonGen (https://www.cottongen.org) is a curated and integrated web-based relational database providing access to publicly available genomic, genetic and breeding... -
Federal
Genomes To Fields (G2F) Inbred Ear Imaging Data 2017
Department of Agriculture —
A subset of ~30 inbreds were evaluated in 2014 and 2015 to develop an image based ear phenotyping tool. The data is stored in CyVerse. Data types in this directory... -
Federal
Uniform Soybean Tests, Southern States
Department of Agriculture —
The Uniform Soybean Tests, Southern States, in place since 1943, evaluate yield, disease resistance, and quality traits of public breeding lines from the southern... -
Federal
Legume Information System
Department of Agriculture —
The Legume Information System (legumeinfo.org) is the USDA-ARS genetics and genomics database for legume crops and relatives. Researchers can also submit their data... -
Federal
BBGD: an Online Database for Blueberry Genomic Data
Department of Agriculture —
NOTE: This dataset is no longer publicly available. BBGD (http://bioinformatics.towson.edu/BBGD/) was developed as a database for blueberry genomics. BBGD is both a... -
Federal
Genomes To Fields 2016
Department of Agriculture —
Phenotypic, genotypic, and environment data for the 2016 field season: The data is stored in CyVerse. Data types in this directory tree are: hybrid and inbred... -
Federal
Data from: Heritable differences in abundance of bacterial rhizosphere taxa are correlated with fungal necrotrophic pathogen resistance
Department of Agriculture —
This Ag Data Commons submission includes the 94 sunflower paired-end sequencing FASTQ files, the corresponding 16S bacterial FASTQ files, and other relevant data to... -
Federal
PeanutBase
Department of Agriculture —
PeanutBase (peanutbase.org) is the primary genetics and genomics database for cultivated peanut and its wild relatives. It houses information about genome sequences,... -
Federal
Data from: Genetic variation among 481 diverse soybean accessions
Department of Agriculture —
This data is from the manuscript titled: "Genetic variation among 481 diverse soybean accessions, inferred from genomic re-sequencing". SNP calls were obtained from... -
Federal
National Plant Germplasm System
Department of Agriculture —
Global food availability and security is based on intensive agricultural production. Over the past century, this intensification has relied heavily on producing crops... -
Federal
Professor: A Motorized Field-Based Phenotyping Cart
Department of Agriculture —
An easy-to-customize, low-cost, low disturbance, motorized, and adjustable proximal sensing cart for field-based high-throughput phenotyping is described. General... -
Federal
Data from: A First Look at the Ability to Use Genomic Prediction for Improving Ratooning Ability of Sugarcane
Department of Agriculture —
The filtered VCF file of 10501 SNPs from the 432 individuals in this study. This dataset was used for genome-wide association study (GWAS) and genomic prediction of... -
Federal
Data from: Dataset of de novo assembly and functional annotation of the transcriptome of blueberry (Vaccinium spp.)
Department of Agriculture —
Blueberry is an economically important berry crop. Both production and consumption of blueberries have increased sharply worldwide in recent years at least partly due... -
Federal
CottonGen Sequence Retrieval
Department of Agriculture —
Sequence Retrieval allows users to download nucleotide and protein sequences including chromosomes, scaffolds, genes, mRNAs, transcript coding sequences, protein,...
80 datasets found