Search datasets
-
The fasta file (BM_OTU.fasta) contain the sequences of the bacterial 16S rRNA-encoding V4 region gene (≈250 nt) for each Operational Taxonomic Unit (OTU). This dataset is associated with the...
Search relevance: 1.00 | Views last month: 9 | Catalog Last Checked: April 21, 2026 at 08:00 PM -
An abundance matrix (BM_OTU.xlsx) contains rows as OTU, columns as samples, and entries representing the abundance of each OTU as a ratio of all sequences obtained for each individual sample....
Search relevance: 1.00 | Views last month: 6 | Catalog Last Checked: April 21, 2026 at 08:00 PM -
A table (DP_OTU.xlsx) contains rows as OTUs, columns as samples, and entries representing the abundance of each OTU. This dataset is associated with the following publication: Gomez-Alvarez, V.,...
Search relevance: 1.00 | Views last month: 2 | Catalog Last Checked: April 21, 2026 at 08:01 PM -
PS_GenBank.fasta file contain the sequences of the bacterial 16S rRNA-encoding gene for each representative sequence. The sequence containing four hypervariable regions was amplified using the...
Search relevance: 1.00 | Views last month: 1 | Catalog Last Checked: April 21, 2026 at 07:58 PM -
An abundance matrix (EX_OTU.xlsx) contains rows as OTU, columns as samples, and entries representing the abundance of each OTU as a ratio of all sequences obtained for each individual sample....
Search relevance: 1.00 | Views last month: 1 | Catalog Last Checked: April 21, 2026 at 07:58 PM -
The EX_Genome_Assemblies.zip file contain the contig sequences (i.e. assembly) of fifteen isolates used for genomic and antibiotic resistance genes (ARG) analysis. EX_OTU.fasta file contain the...
Search relevance: 1.00 | Views last month: 1 | Catalog Last Checked: April 21, 2026 at 07:58 PM -
An abundance matrix (PS_OTU.xlsx) contains rows as OTU, columns as samples, and entries representing the abundance of each OTU as a ratio of all sequences obtained for each individual sample....
Search relevance: 1.00 | Views last month: 1 | Catalog Last Checked: April 21, 2026 at 07:58 PM
