Data from: Development of a versatile resource from 1500 diverse genomes for post-genomics research

Metadata Updated: September 1, 2021

This data set contains 32 million annotated SNPs having an average SNP density of 30 SNPs per kb and 12 non-synonymous SNPs per gene model. These SNPs were identified from a genetically diverse, worldwide, collection of soybean germplasm representing wild, landrace, and improved cultivars. A combination of new and publicly available re-sequencing data was used in this analysis. The accession genotypes and their annotations are described in the manuscript titled: 'Analysis and characterization of 1500 diverse genome sequences as a versatile resource for post-genomics research'.

Access & Use Information

Public: This dataset is intended for public access and use. License: Creative Commons CCZero

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Dates

Metadata Created Date November 10, 2020
Metadata Updated Date September 1, 2021

Metadata Source

Harvested from USDA JSON

Additional Metadata

Resource Type Dataset
Metadata Created Date November 10, 2020
Metadata Updated Date September 1, 2021
Publisher Agricultural Research Service
Unique Identifier Unknown
Maintainer
Identifier dcf591c7-bff4-45c5-ac9f-70bc11f9db30
Data Last Modified 2020-08-13
Public Access Level public
Bureau Code 005:18
Metadata Context https://project-open-data.cio.gov/v1.1/schema/catalog.jsonld
Schema Version https://project-open-data.cio.gov/v1.1/schema
Catalog Describedby https://project-open-data.cio.gov/v1.1/schema/catalog.json
Data Dictionary https://data.nal.usda.gov/dataset/data-analysis-and-characterization-1500-diverse-genome-sequences-versatile-resource-post-genomics-research/resource/5258cf60-3969-418d-bcf4-4dfc0ede0754
Harvest Object Id 3bf74223-457b-4caf-9551-abf2b2b92962
Harvest Source Id d3fafa34-0cb9-48f1-ab1d-5b5fdc783806
Harvest Source Title USDA JSON
License https://creativecommons.org/publicdomain/zero/1.0/
Program Code 005:040
Source Datajson Identifier True
Source Hash 48d79c69a927652ec7be7953c38b168665d79c98
Source Schema Version 1.1
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