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  • Data from: Development of a versatile resource from 1500 diverse genomes for post-genomics research

    Metadata Updated: February 4, 2022

    This data set contains 32 million annotated SNPs having an average SNP density of 30 SNPs per kb and 12 non-synonymous SNPs per gene model. These SNPs were identified from a genetically diverse, worldwide, collection of soybean germplasm representing wild, landrace, and improved cultivars. A combination of new and publicly available re-sequencing data was used in this analysis. The accession genotypes and their annotations are described in the manuscript titled: 'Analysis and characterization of 1500 diverse genome sequences as a versatile resource for post-genomics research'.

    Access & Use Information

    Public: This dataset is intended for public access and use. License: Creative Commons CCZero

    Downloads & Resources

    Dates

    Metadata Created Date November 10, 2020
    Metadata Updated Date February 4, 2022

    Metadata Source

    Harvested from USDA JSON

    Additional Metadata

    Resource Type Dataset
    Metadata Created Date November 10, 2020
    Metadata Updated Date February 4, 2022
    Publisher Agricultural Research Service
    Maintainer
    Identifier dcf591c7-bff4-45c5-ac9f-70bc11f9db30
    Data Last Modified 2022-01-05
    Public Access Level public
    Bureau Code 005:18
    Metadata Context https://project-open-data.cio.gov/v1.1/schema/catalog.jsonld
    Schema Version https://project-open-data.cio.gov/v1.1/schema
    Catalog Describedby https://project-open-data.cio.gov/v1.1/schema/catalog.json
    Data Dictionary https://data.nal.usda.gov/dataset/data-analysis-and-characterization-1500-diverse-genome-sequences-versatile-resource-post-genomics-research/resource/5258cf60-3969-418d-bcf4-4dfc0ede0754
    Harvest Object Id d2308fbf-5481-439c-aa94-a54b8765c045
    Harvest Source Id d3fafa34-0cb9-48f1-ab1d-5b5fdc783806
    Harvest Source Title USDA JSON
    License https://creativecommons.org/publicdomain/zero/1.0/
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    Source Datajson Identifier True
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    Source Schema Version 1.1
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