Search datasets
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The Germplasm Resources Information Network (GRIN) is an online portal for information about agricultural genetic resources that are managed by the Agricultural Research Service of USDA, along...
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CottonGen (https://www.cottongen.org) is a curated and integrated web-based relational database providing access to publicly available genomic, genetic and breeding data to enable basic,...
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This collection contains supplementary information for the manuscript “Genetic mapping and QTL analysis for peanut smut resistance”, which reports the genetic map and quantitative trait loci...
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R scripts and associated data used to select the sweetpotato core sets described in: Slonecki, T. J., Rutter, W. B., Olukolu, B. A., Yencho, G. C., Jackson, D. M., & Wadl, P. A. (2023). Genetic...
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The Sol Genomics Network (SGN) is a clade-oriented database dedicated to the biology of the Solanaceae family which includes a large number of closely related and many agronomically important...
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USDA-ARS coordinated regional wheat (Triticum aestivum L.) breeding trials examine agronomic performance and adaptation over a wider geographic range than single breeding programs can achieve. The...
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Phenotypic data: A total of 510 lines from the global durum panel (GDP) were evaluated for reaction to five isolates of the fungal pathogen Pyrenophora tritici-repentis. The five isolates were...
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This dataset is supplemental to the article "BBGD: an online database for blueberry genomic data," (2007); it is titled "list of genes printed on microarray slides." The article, "BBGD: an online...
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Not only is cacao the basic ingredient in the world’s favorite confection, chocolate, but it provides a livelihood for over 6.5 million farmers in Africa, South America and Asia and ranks as one...
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Phenotypic Data Two durum × cultivated emmer recombinant inbred line (RIL) populations were evaluated for grain yield components under field conditions in North Dakota, USA. The BP025 population...
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Breedbase is a web-based, comprehensive breeding management and analysis software. It can be used to design field layouts, collect phenotypic information using tablets, support the collection of...
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CottonGen has an instance of the JBrowse genome browser for viewing genome data. A list of the genomes available in CottonGen can be accessed by clicking the JBrowse link in the Tools menu. Whole...
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MaizeGDB is a community-oriented, long-term, federally funded informatics service to researchers focused on the crop plant and model organism Zea mays. Genomic, genetic, sequence, germplasm, gene...
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To study the impact of wheat streak mosaic virus on global gene expression in wheat curl mite, we generated a de novo transcriptome assembly using 50 x 50 paired end reads from the Illumina HiSeq...
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Understanding the ion-specific effects of the mineral elements is a central theme of biology because these ions are fundamental to the composition and maintenance of life. However, experiments...
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GRIN-Global is an ongoing international collaborative project to develop shared and open-source applications that help manage plant germplasm collections. The software was jointly developed by the...
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[Note: This version supersedes version 1: https://doi.org/10.15482/USDA.ADC/1520889 Changes in version 2: A new Dataset was added - DataSet1-CardAlleles-iii.xlsx Datasets were renamed and...
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Cotton growth and samplingIn 2020, 161 historical Gh cotton accessions, along with 2 Gb accessions as comparators, were grown in an unirrigated field at the Sandhills Research Station, Jackson...
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PeanutBase (peanutbase.org) is the primary genetics and genomics database for cultivated peanut and its wild relatives. It houses information about genome sequences, genes and predicted functions,...
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Gramene is a curated, open-source, integrated data resource for comparative functional genomics in crops and model plant species. Resources in this dataset:Resource Title: The Gramene Database...
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