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GRIN-Global is an ongoing international collaborative project to develop shared and open-source applications that help manage plant germplasm collections. The software was jointly developed by the...
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The Sol Genomics Network (SGN) is a clade-oriented database dedicated to the biology of the Solanaceae family which includes a large number of closely related and many agronomically important...
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The Germplasm Resources Information Network (GRIN) is an online portal for information about agricultural genetic resources that are managed by the Agricultural Research Service of USDA, along...
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Within this dataset: Genome assembly of Linum lewisii (NDSU_LiLewi_1.0.fasta) First 9 scaffolds represent all 9 chromosomes (e.g. Scaffold_1 is Chromosome 1, Scaffold_9 is Chromosome...
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CottonGen (https://www.cottongen.org) is a curated and integrated web-based relational database providing access to publicly available genomic, genetic and breeding data to enable basic,...
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[Note: This version supersedes version 1: https://doi.org/10.15482/USDA.ADC/1520889 Changes in version 2: A new Dataset was added - DataSet1-CardAlleles-iii.xlsx Datasets were renamed and...
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This collection contains supplementary information for the manuscript “Genetic mapping and QTL analysis for peanut smut resistance”, which reports the genetic map and quantitative trait loci...
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BIMS, the Breeding Information Management System, is a secure and comprehensive online breeding management system developed for the generic Tripal Database Platform which allows breeders to store,...
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Phenotypic Data A subset of 264 lines from the National Small Grains Collection global hexaploid winter wheat germplasm collection was evaluated under controlled growth chamber conditions for...
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This dataset is supplemental to the article "BBGD: an online database for blueberry genomic data," (2007); it is titled "list of genes printed on microarray slides." The article, "BBGD: an online...
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The Maize Genetics Cooperation Stock Center is operated by USDA/ARS, located at the University of Illinois, Urbana/Champaign, and integrated with the National Plant Germplasm System (NPGS). The...
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NOTE: This dataset is no longer publicly available. BBGD (http://bioinformatics.towson.edu/BBGD/) was developed as a database for blueberry genomics. BBGD is both a sequence and gene expression...
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The Triticeae Toolbox Barley (T3 Barley) is an extension of The Hordeum Toolbox (THT), which was created by the preceding Barley CAP. T3 Barley incorporates all of the THT data. The Triticeae...
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This Ag Data Commons submission includes the 94 sunflower paired-end sequencing FASTQ files, the corresponding 16S bacterial FASTQ files, and other relevant data to the study described...
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Primer3web version 4.0.0 allows users to pick PCR primers from a DNA sequence based on criteria including: oligonucleotide melting temperature, size, GC content, and primer-dimer...
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GrainGenes is an international, centralized crop database for peer-reviewed small grains data and information portal that serves the small grains research and breeding communities (wheat, barley,...
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Hessian fly (HF, Mayetiola destructor Say) is a major pest on wheat and can cause significant yield losses. Currently there are some HF resistance genes deployed, but mostly in hexaploid winter...
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This data is from the manuscript titled: "Genetic variation among 481 diverse soybean accessions, inferred from genomic re-sequencing". SNP calls were obtained from resequencing 481 diverse...
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Phenotypic Data Two durum × cultivated emmer recombinant inbred line (RIL) populations were evaluated for grain yield components under field conditions in North Dakota, USA. The BP025 population...
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CottonGen has an instance of the JBrowse genome browser for viewing genome data. A list of the genomes available in CottonGen can be accessed by clicking the JBrowse link in the Tools menu. Whole...
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