Data from: BBGD: an online database for blueberry genomic data

Metadata Updated: February 21, 2020

This dataset is supplemental to the article "BBGD: an online database for blueberry genomic data," (2007); it is titled "list of genes printed on microarray slides." The article, "BBGD: an online database for blueberry genomic data," (2007) involving blueberry cold hardiness experiments has a list of all the genes that were printed on microarray slides. This dataset, supplemental to the article, is called: "list of genes printed on microarray slides." 1471-2229-7-5-s1.xls 663k. By using the BBGD database, researchers developed EST-based markers for mapping, and have identified a number of "candidate" cold tolerance genes that are highly expressed in blueberry flower buds after exposure to low temperatures. BBGD (http://bioinformatics.towson.edu/BBGD/) is a public online database, and was developed for blueberry genomics. BBGD is both a sequence and gene expression database: it stores both EST and microarray data, and allows scientists to correlate expression profiles with gene function. Presently, the main focus of the database is the identification of genes in blueberry that are significantly induced or suppressed after low temperature exposure. Data was collected sometime between 2000 and 2007 - exact dates are unknown.

Access & Use Information

Public: This dataset is intended for public access and use. License: Creative Commons CCZero

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Dates

Metadata Created Date February 21, 2020
Metadata Updated Date February 21, 2020

Metadata Source

Harvested from USDA JSON

Additional Metadata

Resource Type Dataset
Metadata Created Date February 21, 2020
Metadata Updated Date February 21, 2020
Publisher Agricultural Research Service
Unique Identifier d134be9f-7ca8-497f-aa5b-292c295bf5bb
Maintainer
Alkharouf, Nadim W.
Maintainer Email
Public Access Level public
Bureau Code 005:18
Metadata Context https://project-open-data.cio.gov/v1.1/schema/catalog.jsonld
Schema Version https://project-open-data.cio.gov/v1.1/schema
Catalog Describedby https://project-open-data.cio.gov/v1.1/schema/catalog.json
Data Dictionary https://data.nal.usda.gov/dataset/data-bbgd-online-database-blueberry-genomic-data/resource/1705568b-4c89-4bc5-9b35-33f11e88f90a
Harvest Object Id 46f88d01-dd2d-4d74-a1eb-f46ddacc6830
Harvest Source Id 50ca39af-9ddb-466d-8cf3-84d67a204346
Harvest Source Title USDA JSON
License https://creativecommons.org/publicdomain/zero/1.0/
Data Last Modified 2019-09-24
Program Code 005:040
Source Datajson Identifier True
Source Hash 8a8761eb0d810cb7e4783d0873959a28af670f9b
Source Schema Version 1.1

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