Data Catalog

• Federal

  Data from: Supplementation with soluble or insoluble rice-bran fibers increases short-chain fatty acid producing bacteria in the gut microbiota <i>in vitro</i>

  Department of Agriculture —

  The SHIME® (Simulator of the Human Intestinal Microbial Ecology) was used for in vitro cultivation of the human gut microbiota (3 donors) with additions of either...

  • CSV
  • CSV
• Federal

  Analytical Performance of Direct-to-Consumer Gut Microbiome Testing Services

  National Institute of Standards and Technology —

  This repository contains raw and intermediate data files as well as analysis code from the manuscript "Evaluating the Analytical Performance of Direct-to-Consumer Gut...

  • TEXT
  • zip file contains fastq files within two folders depending on the donor
  • zip folder includes: fastq files (for 16S), r markdowns, rdata, csv, xlsx
  • zip folder includes: r markdowns, rdata, csv, png
• Federal

  Data from: Impact of Ivermectin on the Gut Microbial Ecosystem

  Department of Agriculture —

  The SHIME® (Simulator of the Human Intestinal Microbial Ecology) was used for in vitro cultivation of the human gut microbiota (3 donors) prior to and following the...

  • CSV
  • CSV
• Federal

  Data from: Metagenomes and Metagenome-Assembled Genomes from Ex Vivo Fecal Incubations of Six Unique Donors

  Department of Agriculture —

  This is a dataset consisting of donor-specific collections of 78 metagenomes (13 / donor) and 143 metagenome-assembled genomes (MAGs) representing the gut microbiomes...

  • CSV
  • CSV
  • XLS
  • XLS

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