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Federal
Code from: Aspergillus flavus expression database (AFED), a comprehensive resource for Aspergillus flavus gene expression profiling
Department of Agriculture —
Public RNA-Seq data was used to quantify gene expression abundance for 604 Aspergillus flavus samples from 52 experiments (bioprojects). Using abundance data, we... -
Federal
Data from: Tephritid fruit fly gut bacterial population and community dynamics following adult emergence
Department of Agriculture —
Data include microbial count data (CFUs), 16S-rRNA copy number data (qPCR), and microbial community (microbiome) data from the guts of the invasive tephritid fruit... -
Federal
Data and code from: Cultivation and dynamic cropping processes impart land-cover heterogeneity within agroecosystems: a metrics-based case study in the Yazoo-Mississippi Delta (USA)
Department of Agriculture —
This dataset contains data and code from the manuscript:Heintzman, L.J., McIntyre, N.E., Langendoen, E.J., & Read, Q.D. (2024). Cultivation and dynamic cropping... -
Federal
SolarCalQ - Version 1
Department of Agriculture —
SolarCalQ • Version 1.0 - Java model to simulate spectral quality at any location on the globe. The purpose of this JAVA model is to simulate the spectral quality of... -
Federal
Data from: Enzymatic Modification of Menhaden Oil to Incorporate Caprylic and/or Stearic Acid
Department of Agriculture —
Menhaden oil was enzymatically modified with caprylic (C8:0) and/or stearic acid (C18:0) to produce structured lipids (SL) with high amount of polyunsaturated fatty... -
Federal
Data and code from: Cover crop and crop rotation effects on tissue and soil population dynamics of Macrophomina phaseolina and yield in no-till system - V2
Department of Agriculture —
[Note 2023-08-14 - Supersedes version 1, https://doi.org/10.15482/USDA.ADC/1528086 ] This dataset contains all code and data necessary to reproduce the analyses in... -
Federal
Data and code from: Cotton stalk management and a cover crop produce minimal effects on cotton leafroll dwarf virus
Department of Agriculture —
In 2017, cotton (Gossypium hirsutum L.) leafroll dwarf virus (CLRDV) was first reported in the United States. One CLRDV inoculum source includes the previous year’s... -
Federal
Data and scripts from: Revealing reassortment in influenza A viruses with TreeSort
Department of Agriculture —
This repository contains scripts and data to replicate the experiments fromMarkin, A., Macken, C.A., Baker, A.L., and Anderson, T.K., 2024. Revealing reassortment in... -
Federal
Data and code from: Predictions of Aboveground Herbaceous Production from Satellite-Derived APAR Are More Sensitive to Ecosite than Grazing Management Strategy in Shortgrass Steppe
Department of Agriculture —
This study set out to accurately estimate the amount of herbaceous biomass grown in rangelands, which is difficult to observe directly. Herbaceous biomass is the... -
Federal
The Cause of Increased Effectiveness of Water-In-Oil Emulsion over Water Application of Trichoderma ovalisporum on Therobroma cacao Pods
Department of Agriculture —
Previous research conducted in Costa Rica determined that Trichoderma ovalisporum, when applied in a water-in-oil emulsion to Theobroma cacao pods, had less... -
Federal
Data From: Effects of species and sex on the gut microbiome of four laboratory-reared fruit fly lines (Diptera: Tephritidae) using full-length 16S rRNA PacBio Kinnex sequencing
Department of Agriculture —
Species- and sex-related differences of four laboratory tephritid fruit fly (Diptera: Tephritidae) gut microbiomes evaluated with full-length 16S rRNA PacBio Kinnex... -
Federal
iStitch: GUI-based Image Stitching Software
Department of Agriculture —
GUI-based software coded in PYTHON to automate image stitching and alignment processes from a set of tile images for the high throughput image analytics by... -
Federal
Data and code from: Comparison of in-field and laboratory-based phenotyping methods for evaluation of aflatoxin accumulation in maize inbred lines
Department of Agriculture —
This dataset contains all data and R code, in RMarkdown notebook format, needed to reproduce all statistical analysis, figures, and tables in the manuscript:Jeffers,... -
Federal
Hangry bees: Pollen dearth impacts honey bee (<i>Apis mellifera</i>) behavior and physiology
Department of Agriculture —
Nutritional deprivation is known to contribute to increased honey bee mortality, physiological stress, aberrant behaviors, and disease incidence. To investigate the... -
Federal
Data from: Impact of larval food source on the stability of the <i>Bactrocera dorsalis </i>microbiome
Department of Agriculture —
We conducted a fly rearing experiment to characterize diet-induced changes in the microbiome of female Bactrocera dorsalis. In order to explicitly investigate the... -
Federal
Data and code from: Avocado cultivar and tree-to-tree leaf compositional differences affect infestation severity of avocado lace bug, <i>Pseudocysta perseae</i> (Hemiptera: Tingidae)
Department of Agriculture —
Datasets and R script used for article accepted to Environmental Entomology (June 5, 2024):"Avocado cultivar and tree-to-tree leaf compositional differences affect... -
Federal
Data from: Modeling the Spread of a Livestock Disease With Semi-Supervised Spatiotemporal Deep Neural Networks
Department of Agriculture —
This dataset contains the spatiotemporal data used to train the spatiotemporal deep neural networks described in "Modeling the Spread of a Livestock Disease With...