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Data and code from: Avocado cultivar and tree-to-tree leaf compositional differences affect infestation severity of avocado lace bug, <i>Pseudocysta perseae</i> (Hemiptera: Tingidae)

Metadata Updated: June 5, 2025

Datasets and R script used for article accepted to Environmental Entomology (June 5, 2024):"Avocado cultivar and tree-to-tree leaf compositional differences affect infestation severity of avocado lace bug, Pseudocysta perseae (Hemiptera: Tingidae)."Authors: Bosch, Michael; Sun, Xiuxiu; Hall, Sierra; Love, Ken; Cox, David; Matsumoto, Tracie; Liang, Peishih; Follett, Peter; Stockton, DaraRep_GLMM_UHKCES.csv: Data used for repeated measures generalized linear mixed model for abundance surveys conducted at the University of Hawai'i Kona Cooperative Extension Service orchard.Rep_GLMM_CC.csv: Data used for repeated measures generalized linear mixed model for abundance surveys conducted at the Captain Cook orchard.ALB_Honaunau.csv: Data summarizing avocado lace bug abundance from leaves collected from the Honaunau orchard. Is to be used to perform generalized linear mixed models between lace bug abundance and sugars in corresponding avocado leaves.LeafTraits_Honaunau.csv: Data for performing generalized linear mixed models between avocado lace bug abundance and several avocado leaf traits from leaves collected from the Honaunau orchard.Sugars_Honaunau.csv: Data for performing generalized linear mixed models between avocado lace bug abundance and avocado leaf sugar content from leaves collected from the Honaunau orchard.Fig1_Average.csv: Data averaging avocado lace bug abundance across trees surveyed at the University of Hawai'i Kona Cooperative Extension Service and Captain Cook orchards. To be used to generating figure 1 in manuscript.Fig1_Sites.csv: Data on avocado lace bug abundance across trees surveyed at the University of Hawai'i Kona Cooperative Extension Service and Captain Cook orchards. To be used to generating figure 1 in manuscript.LogOdds_USDAGermplasm.csv: Data used for performing a repeated measures proportional odds logistic regression on avocado lace bug infestation category surveys conducted at the USDA Germplasm Repository.EE_Rscript.R: R script used to run analyses conducted and construct figures presented in the corresponding manuscript. Required R packages include:tidyversereshape2DHARMascalesglmmTMBemmeanscowplotrepolr

Access & Use Information

Public: This dataset is intended for public access and use. License: Creative Commons Attribution

Downloads & Resources

Dates

Metadata Created Date June 29, 2024
Metadata Updated Date June 5, 2025

Metadata Source

Harvested from USDA JSON

Additional Metadata

Resource Type Dataset
Metadata Created Date June 29, 2024
Metadata Updated Date June 5, 2025
Publisher Agricultural Research Service
Maintainer
Identifier 10.15482/USDA.ADC/25988068.v1
Data Last Modified 2025-05-02
Public Access Level public
Bureau Code 005:18
Metadata Context https://project-open-data.cio.gov/v1.1/schema/catalog.jsonld
Schema Version https://project-open-data.cio.gov/v1.1/schema
Catalog Describedby https://project-open-data.cio.gov/v1.1/schema/catalog.json
Harvest Object Id 8e4d40e0-3905-482f-b375-126d8fa3a037
Harvest Source Id d3fafa34-0cb9-48f1-ab1d-5b5fdc783806
Harvest Source Title USDA JSON
License https://creativecommons.org/licenses/by/4.0/
Program Code 005:040
Source Datajson Identifier True
Source Hash 8018b467a45e680af0df3ad03087aa9b5ffafa0b580169db172b69843306b1fb
Source Schema Version 1.1
Temporal 2021-06-01/2023-05-01

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