Found 20 datasets matching filters.
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CMRG v1.00 of a small variant benchmark and structural variant benchmark focused on 273 challenging medically relevant genes for the Genome in a Bottle (GIAB) sample HG002 (aka Ashkenazi son)....
Search relevance: 1.00 | Views last month: 11 | Catalog Last Checked: August 02, 2025 at 02:35 PM -
This Ag Data Commons submission includes the 94 sunflower paired-end sequencing FASTQ files, the corresponding 16S bacterial FASTQ files, and other relevant data to the study described...
Search relevance: 1.00 | Views last month: 6 | Catalog Last Checked: May 05, 2026 at 11:46 PM -
T-cell epitopes represent sampled environmental- and self-peptides loaded into major histocompatibility complex (MHC) proteins. Bioinformatic tools have been produced to predict these interactions...
Search relevance: 1.00 | Views last month: 6 | Catalog Last Checked: May 05, 2026 at 11:40 PM -
Consumption of food contaminated with Shiga toxin-producing Escherichia coli (STEC) causes millions of illnesses in the United States annually. Long-read sequencing could be used to reduce the...
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Changes in influenza viruses that infect pigs have been observed for over two decades. The evolution of these viruses has led to several new strains. For instance, one such strain known as H1N2...
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Salmonella is a pathogenic microorganism linked to foodborne outbreaks associated with egg and egg products. This microorganism can resist sanitation of the egg processing equipment and form...
Search relevance: 1.00 | Views last month: 3 | Catalog Last Checked: May 05, 2026 at 11:40 PM -
Jaleh A. Abedini, Sakshi Handa, Stephen Edwards, Brian Chorley, Hisham El-Masri, Identification of differentially expressed genes and networks related to hepatic lipid dysfunction, Toxicology and...
Search relevance: 1.00 | Views last month: 2 | Catalog Last Checked: April 21, 2026 at 08:03 PM -
Data about Phakopsora pachyrhizi, causative agent of soybean rust. Genomics and Bioinformatics Research Unit, Stoneville, MS. Resources in this dataset:Resource Title: All supplemental files. File...
Search relevance: 1.00 | Views last month: 1 | Catalog Last Checked: May 05, 2026 at 11:39 PM -
The precisionFDA Truth Challenge V2 aimed to assess the state-of-the-art of variant calling in difficult-to-map regions and the Major Histocompatibility Complex (MHC). Starting with FASTQ files,...
Search relevance: 1.00 | Views last month: 1 | Catalog Last Checked: August 02, 2025 at 02:24 PM -
Data file for "Vliet SMF, Hazemi M, Blatz D, Jensen M, Mayasich S, Transue TR, Simmons C, Wilkinson A, LaLone CA. Demonstration of the Sequence Alignment to Predict Across Species Susceptibility...
Search relevance: 1.00 | Views last month: 1 | Catalog Last Checked: April 21, 2026 at 08:04 PM -
The advancement of protein structural prediction tools, exemplified by AlphaFold and Iterative Threading ASSEmbly Refinement, has enabled the prediction of protein structures across species based...
Search relevance: 1.00 | Views last month: 0 | Catalog Last Checked: April 21, 2026 at 08:05 PM -
Supporting Information for "Jensen, M.A., Blatz, D.J. and LaLone, C.A. (2023), Defining the Biologically Plausible Taxonomic Domain of Applicability of an Adverse Outcome Pathway: A Case Study...
Search relevance: 1.00 | Views last month: 0 | Catalog Last Checked: April 21, 2026 at 08:04 PM -
Background Currently, most genome annotation is curated by centralized groups with limited resources. Efforts to share annotations transparently among multiple groups have not yet been...
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The fathead minnow (Pimephales promelas) is a laboratory model organism widely used in regulatory toxicity testing and ecotoxicology research. Despite, the wealth of toxicological data for this...
Search relevance: 1.00 | Views last month: 0 | Catalog Last Checked: April 21, 2026 at 07:56 PM -
Short Tandem Repeat DNA Internet DataBase is intended to benefit research and application of short tandem repeat DNA markers for human identity testing. Facts and sequence information on each STR...
Search relevance: 1.00 | Views last month: 0 | Catalog Last Checked: August 02, 2025 at 01:29 PM -
meta data. This dataset is associated with the following publication: Kim, Y.H., J. Rager, I. jaspers, and M. Gilmour. Computational Approach to Link Chemicals in Anthropogenic Smoke Particulate...
Search relevance: 1.00 | Views last month: 0 | Catalog Last Checked: April 21, 2026 at 08:06 PM -
Supplemental datafiles for journal article 'High-Throughput Transcriptomics Screen of ToxCast Chemicals in U-2 OS Cells'.
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This dataset was generated to support the differential expression analysis, transcriptomic similarity scoring analysis, exposure chemistry profiles, mouse pulmonary toxicity measures and...
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Background: The EMBL Nucleotide Sequence Database is a comprehensive database of DNA and RNA sequences and related information traditionally made available in flat-file format. Queries...
Search relevance: 1.00 | Views last month: 0 | Catalog Last Checked: September 07, 2025 at 08:52 AM -
Supplemental data for "LaLone CA, Blatz DJ, Jensen MA, Vliet SMF, Mayasich S, Mattingly KZ, Transue TR, Melendez W, Wilkinson A, Simmons CW, Ng C, Zhang C, Zhang Y. From Protein Sequence to...
Search relevance: 1.00 | Views last month: 0 | Catalog Last Checked: April 21, 2026 at 08:05 PM
