Osmia lignaria genome assembly release v1
Genome was assembled from a single male, gDNA isolated from the flight muscle using the Gentra Puregene kit. PacBio S2 sequencing at 127x coverage, polished with NextSeq-500 Illumina reads at >150x coverage.
The project is funded by the USDA Agricultural Research Service and North Dakota State University through a Track-2 EPSCoR grant (NSF-EPSCoR-1826834). Resources in this dataset:Resource Title: Osmia lignaria genome assembly release v1. File Name: OligGenome-v1.zip
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Complete Metadata
| @type | dcat:Dataset |
|---|---|
| accessLevel | public |
| bureauCode |
[ "005:18" ] |
| contactPoint |
{ "fn": "Melicher, Dacotah", "hasEmail": "mailto:dacotah.melicher@usda.gov" } |
| description | <p>Genome was assembled from a single male, gDNA isolated from the flight muscle using the Gentra Puregene kit. PacBio S2 sequencing at 127x coverage, polished with NextSeq-500 Illumina reads at >150x coverage.</p> <p>The project is funded by the USDA Agricultural Research Service and North Dakota State University through a Track-2 EPSCoR grant (NSF-EPSCoR-1826834). </p><div><br>Resources in this dataset:</div><br><ul><li><p>Resource Title: Osmia lignaria genome assembly release v1.</p> <p>File Name: OligGenome-v1.zip</p></li></ul><p></p> |
| distribution |
[ { "@type": "dcat:Distribution", "title": "OligGenome-v1.zip", "format": "zip", "mediaType": "application/zip", "downloadURL": "https://ndownloader.figshare.com/files/43367772" } ] |
| identifier | 10.15482/USDA.ADC/1518471 |
| keyword |
[ "ARS", "NP305", "bees", "data.gov", "de novo genome", "native bees", "pollinators", "solitary bees" ] |
| license | https://www.usa.gov/publicdomain/label/1.0/ |
| modified | 2025-11-22 |
| programCode |
[ "005:040" ] |
| publisher |
{ "name": "Agricultural Research Service", "@type": "org:Organization" } |
| spatial |
"{"type": "Point", "coordinates": [-111.9287109375, 39.864775423313]}"
|
| title | Osmia lignaria genome assembly release v1 |
