De novo transcriptome assembly of Schizaphis gramium Biotype I feeding on wheat

Metadata Updated: February 4, 2022

Transcriptome was generated from pooled adult aphids that were fed on wheat plants containing the Dn4 and DN7 resistance gene as well as Yuma plants containing no resistant genes (Dn0). The assembly was generated using Trinity. All assembled transcripts, including those that were not predicted to encode ORFs, are included along with their corresponding functional annotations from Trinotate.

Access & Use Information

Public: This dataset is intended for public access and use. License: Creative Commons CCZero

Downloads & Resources

Web Resourcefasta
Trinity.fasta__0.txt

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Text FileTEXT
Greenbug_FilteredTrinity.transdecoder.mRNA_.fasta_.txt

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MS Excel FileEXCEL
Greenbug_trinotate_annotation_report.xls

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Text FileTEXT
Greenbug_FilteredTrinityfasta_fromTrial6.sh_.o2516954.fasta_.transdecoder.pep...

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Dates

Metadata Created Date	November 10, 2020
Metadata Updated Date	February 4, 2022

Metadata Source

Data.json Data.json Metadata
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Harvested from USDA JSON

Additional Metadata

Resource Type	Dataset
Metadata Created Date	November 10, 2020
Metadata Updated Date	February 4, 2022
Publisher	Agricultural Research Service
Maintainer	Scully, Erin
Identifier	7c085abf-7fb7-4cbf-a853-e2735d6ba1f3
Data Last Modified	2020-05-29
Public Access Level	public
Bureau Code	005:18
Metadata Context	https://project-open-data.cio.gov/v1.1/schema/catalog.jsonld
Schema Version	https://project-open-data.cio.gov/v1.1/schema
Catalog Describedby	https://project-open-data.cio.gov/v1.1/schema/catalog.json
Harvest Object Id	18e3a914-177b-443b-891e-abc6d2ca1ea4
Harvest Source Id	d3fafa34-0cb9-48f1-ab1d-5b5fdc783806
Harvest Source Title	USDA JSON
License	https://creativecommons.org/publicdomain/zero/1.0/
Old Spatial	{"type":"Point","coordinates":-96.580518186092,39.19235913618}
Program Code	005:040
Source Datajson Identifier	True
Source Hash	43af24aa2cd8378980d8eadf756665400ac41c0e
Source Schema Version	1.1
Spatial	{"type":"Point","coordinates":-96.580518186092,39.19235913618}

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