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Comparison of whole transcriptome and targeted RNA sequencing for ecological high-throughput transcriptomics

Published by U.S. EPA Office of Research and Development (ORD) | U.S. Environmental Protection Agency | Catalog Last Checked: August 03, 2026 at 12:52 AM | Dataset Last Updated: June 27, 2025
Supplementary data for "Comparison of whole transcriptome and targeted RNA sequencing for ecological high-throughput transcriptomics". This dataset is associated with the following publication: Villeneuve, D., M. Nash, A. Biales, K. Bush, G. Evensen, L. Everett, J. Haselman, M. Hazemi, M. Le, H. Poynton, B. Seligmann , L. Wehmas, J. Yeakley, and K. Flynn. Comparison of whole transcriptome and targeted RNA sequencing for ecological high-throughput transcriptomics. REGULATORY TOXICOLOGY AND PHARMACOLOGY. Elsevier Science Ltd, New York, NY, USA, 162: 105898, (2025).

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Complete Metadata
@type dcat:Dataset
accessLevel public
bureauCode 
[
  "020:00"
]
contactPoint 
{
  "fn": "Daniel Villeneuve",
  "hasEmail": "mailto:villeneuve.dan@epa.gov"
}
description Supplementary data for "Comparison of whole transcriptome and targeted RNA sequencing for ecological high-throughput transcriptomics". This dataset is associated with the following publication: Villeneuve, D., M. Nash, A. Biales, K. Bush, G. Evensen, L. Everett, J. Haselman, M. Hazemi, M. Le, H. Poynton, B. Seligmann , L. Wehmas, J. Yeakley, and K. Flynn. Comparison of whole transcriptome and targeted RNA sequencing for ecological high-throughput transcriptomics. REGULATORY TOXICOLOGY AND PHARMACOLOGY. Elsevier Science Ltd, New York, NY, USA, 162: 105898, (2025).
distribution 
[
  {
    "title": "https://clowder.edap-cluster.com/datasets/6840b9e5e4b096bca883eb50",
    "accessURL": "https://clowder.edap-cluster.com/datasets/6840b9e5e4b096bca883eb50"
  },
  {
    "title": "1-s2.0-S027323002500128X-mmc1.xlsx",
    "mediaType": "application/vnd.openxmlformats-officedocument.spreadsheetml.sheet",
    "downloadURL": "https://pasteur.epa.gov/uploads/10.23719/d-t4c4/1-s2.0-S027323002500128X-mmc1.xlsx"
  },
  {
    "title": "1-s2.0-S027323002500128X-mmc2.docx",
    "mediaType": "application/vnd.openxmlformats-officedocument.wordprocessingml.document",
    "downloadURL": "https://pasteur.epa.gov/uploads/10.23719/d-t4c4/1-s2.0-S027323002500128X-mmc2.docx"
  }
]
identifier https://doi.org/10.23719/d-t4c4
keyword 
[
  "New Approach Methods",
  "computational toxicology",
  "ecotoxicology",
  "federal prize competition",
  "high-throughput transcriptomics"
]
license https://pasteur.epa.gov/license/sciencehub-license.html
modified 2025-06-27
programCode 
[
  "020:000"
]
publisher 
{
  "name": "U.S. EPA Office of Research and Development (ORD)",
  "subOrganizationOf": {
    "name": "U.S. Environmental Protection Agency",
    "subOrganizationOf": {
      "name": "U.S. Government"
    }
  }
}
references 
[
  "https://doi.org/10.1016/j.yrtph.2025.105898"
]
rights 
null
title Comparison of whole transcriptome and targeted RNA sequencing for ecological high-throughput transcriptomics

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