Angus Sequence Dataset Collection
Whole genome sequence data for Bovidae Bos taurus - beef Angus, 30 animals in total. The data is in "fastq" format. There are two versions of each file because we did paired end sequencing. There are two reads for each of the 210 data lines (a forward and a reverse read) summing to 420 total. A diagram of this is attached. In the diagram, the two reads would correspond to read 1 and read 3. Resources in this dataset:Resource Title: CSU_136201_SampleSheet.csv - list of all Angus sequence files. File Name: CSU_136201_SampleSheet.csvResource Description: This spreadsheet lists all 210 data files associated with the sequencing of these 30 Angus animals
Resource Title: Sequence Reads Diagram. File Name: SequenceReads.pngResource Description: There are two reads for each of the 210 data lines (a forward and a reverse read) summing to 420 total. In the diagram, the two reads would correspond to read 1 and read 3.
Resources
2 resources available
-
CSU_136201_SampleSheet.csv
CSV -
SequenceReads.png
PNG
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Complete Metadata
| @type | dcat:Dataset |
|---|---|
| accessLevel | public |
| bureauCode |
[
"005:18"
]
|
| contactPoint |
{
"fn": "Blackburn, Harvey",
"hasEmail": "mailto:harvey.blackburn@usda.gov"
}
|
| description | <p>Whole genome sequence data for Bovidae Bos taurus - beef Angus, 30 animals in total. The data is in "fastq" format. There are two versions of each file because we did paired end sequencing. There are two reads for each of the 210 data lines (a forward and a reverse read) summing to 420 total. A diagram of this is attached. In the diagram, the two reads would correspond to read 1 and read 3. </p><div><br>Resources in this dataset:</div><br><ul><li><p>Resource Title: CSU_136201_SampleSheet.csv - list of all Angus sequence files.</p> <p>File Name: CSU_136201_SampleSheet.csv</p><p>Resource Description: This spreadsheet lists all 210 data files associated with the sequencing of these 30 Angus animals</p> <p></p></li><br><li><p>Resource Title: Sequence Reads Diagram.</p> <p>File Name: SequenceReads.png</p><p>Resource Description: There are two reads for each of the 210 data lines (a forward and a reverse read) summing to 420 total. In the diagram, the two reads would correspond to read 1 and read 3.</p></li></ul><p></p> |
| distribution |
[
{
"@type": "dcat:Distribution",
"title": "CSU_136201_SampleSheet.csv",
"format": "csv",
"mediaType": "text/plain",
"downloadURL": "https://ndownloader.figshare.com/files/43372680"
},
{
"@type": "dcat:Distribution",
"title": "SequenceReads.png",
"format": "png",
"mediaType": "image/png",
"downloadURL": "https://ndownloader.figshare.com/files/43372686"
}
]
|
| identifier | 10.15482/USDA.ADC/1529241 |
| keyword |
[
"ARS",
"DNA sequence",
"GRIN",
"NP101",
"animals",
"cryopreservation",
"data.gov",
"genetic diversity",
"germplasm"
]
|
| license | https://www.usa.gov/publicdomain/label/1.0/ |
| modified | 2025-11-21 |
| programCode |
[
"005:040"
]
|
| publisher |
{
"name": "Agricultural Research Service",
"@type": "org:Organization"
}
|
| spatial |
"{"type": "Point", "coordinates": [-106.56610600168, 41.222307724193]}"
|
| temporal | 2012-01-01/2012-12-31 |
| title | Angus Sequence Dataset Collection |
