51 datasets found
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Federal
Environmental DNA mapping of Zebra Mussel populations: Data
Department of the Interior —
Data is a spreadsheet of the number of copies of Zebra Mussel DNA detected and the number of positive detections for Zebra Mussel DNA from water samples collected... -
Federal
Mill Creek DNA biodiversity 2016 for SH
U.S. Environmental Protection Agency —
OTU sequence reads by sample, along with assigned taxonomy. This dataset is associated with the following publication: Bagley, M., E. Pilgrim, M. Knapp, C. Yoder, J.... -
Federal
Reporting the limits of detection (LOD) and quantification (LOQ) for environmental DNA assays: Data
Department of the Interior —
This data set was collected to provide examples and aid in developing a standardized way of determining LOD and LOQ for eDNA assays and has 3 data files.... -
Federal
Mucket eDNA detection in Wallen’s Bend, Clinch River, Tennessee, September 2019
Department of the Interior —
The data describe the technical performance of a designed qPCR assay for the detection of mucket (Actinonaias ligamentina) eDNA from field collected water samples.... -
Federal
Detection of Seagrass Pathogens Using Environmental DNA (eDNA), North Pacific, 2016-present
Department of the Interior —
This data set is comprised of one table with sampling information and NCBI BioProject accession numbers for sequence information of this amplicon-based study... -
Federal
2023 Shakedown + EXPRESS West Coast Exploration
National Oceanic and Atmospheric Administration, Department of Commerce —
From April 13-27, 2023 (Portland, Oregon, to Seattle, Washington), NOAA Ocean Exploration conducted the 2023 Shakedown + EXPRESS West Coast Exploration expedition... -
Federal
White Tailed Deer Inventory at Vicksburg National Military Park 2023 - Open Format Dataset
Department of the Interior —
White-tailed deer (WTD) can exert substantial impacts on the ecosystems in the Southeastern United States. WTD populations in Vicksburg National Military Park (VICK)... -
Federal
Refining the use of environmental DNA (eDNA) as a method to detect presence of the endangered Topeka Shiner (Notropis topeka)
Department of the Interior —
qPCR detection results for Topeka Shiner eDNA surveys in MN and IA Oxbows. This data was used to determine the optimal eDNA sampling methods for this species in oxbow... -
Federal
Environmental DNA shedding rates in laboratory conditions for Cumberlandia monodonta, Actinonaias ligamentina, and Lampsilis siliquoidea - Biomass experiments
Department of the Interior —
Data describe designed environmental DNA (eDNA) experiments for the estimation of eDNA shedding rates for the spectaclecase (Cumberlandia monodonta), mucket... -
Federal
Cryptobiota metabarcoding using Autonomous Reef Monitoring Structure (ARMS) Deployed at Coral Reef Sites across American Samoa from 2012 to 2015
National Oceanic and Atmospheric Administration, Department of Commerce —
The data described here includes cytochrome oxidase I (COI) DNA metabarcoding data collected from Autonomous Reef Monitoring Structures (ARMS). ARMS were deployed by... -
Federal
qPCR Results for An Assessment of Pathogens in National Park Hot Springs
Department of the Interior —
In 2018 and 2019, a multidisciplinary team from the U.S. Geological Survey (USGS), National Park Service, The Commonwealth Scientific and Industrial Research... -
Federal
Preliminary Assessment of Pacific Lamprey Environmental DNA Samples from Western Washington Rivers.
Department of the Interior —
qPCR detection results for Pacific Lamprey eDNA surveys from Western Washington Rivers and Streams. Water samples were collected via filtration and shipped to the... -
Federal
Asian carp eggs cannot be distinguished from other cyprinid species on the basis of morphology alone: Supporting Data
Department of the Interior —
Eggs were collected in the Upper Mississippi main stem (Pool 9 and Pool 11) during the summer of 2013. Using previously published morphological characteristics, eggs... -
Federal
Combined river, stream, and lake sampling for optimizing fish eDNA collection
U.S. Environmental Protection Agency —
DNA metabarcoding data as raw DNA sequences from the DNA sequencing instrument along with spreadsheets of data generated from bioinformatic analyses of the raw data.... -
Federal
Evaluating Oyster Reefs as Habitat: Comparing the Utility of Ecological Metrics to Assess Ecosystem Function - NERRS/NSC(NERRS Science Collaborative)
National Oceanic and Atmospheric Administration, Department of Commerce —
This multi-reserve catalyst project compared established and emerging methods for assessing intertidal oyster reef community structure and ecosystem function. With... -
Federal
Cryptobiota metabarcoding using Autonomous Reef Monitoring Structure (ARMS) Deployed in Batangas, Philippines from 2012 to 2015
National Oceanic and Atmospheric Administration, Department of Commerce —
The data described here includes cytochrome oxidase I (COI) DNA metabarcoding data collected from Autonomous Reef Monitoring Structures (ARMS). ARMS were deployed by... -
Federal
Cascades Frog and eDNA Inventory at Lassen Volcanic National Park - Open Format Dataset
Department of the Interior —
The Cascades frog (Rana cascadae) is one of two frog species known to occur historically in Lassen Volcanic National Park (LAVO) in Northern California. However, no... -
Federal
Puuhonua o Honaunau and Kaloko-Honokohau National Historical Parks, carbon dioxide treatment and qPCR eDNA assays for eradicating and monitoring invasive fish in anchialine pools, 2019-2022 (ver. 2.0, July 2023)
Department of the Interior —
This data release includes metadata and tabular data that documents lab and field trials testing the efficacy of carbon dioxide (CO2) gas diffused into water to... -
Federal
Environmental DNA shedding rates in laboratory conditions for Cumberlandia monodonta, Actinonaias ligamentina, and Lampsilis siliquoidea.
Department of the Interior —
Data describe designed environmental DNA (eDNA) experiments for the estimation of eDNA shedding rates for the spectaclecase (Cumberlandia monodonta), mucket... -
Federal
Tidewater goby and estuarine fish records from seining, qPCR and metabarcoding data for Southern California Estuaries in 2023
Department of the Interior —
This data archive includes R code and data for reproducing the analyses and figures in Lafferty, Metabarcoding is (usually) more cost effective than seining or qPCR...
51 datasets found