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Federal
Prediction of Cattle Fever Tick Outbreaks in United States Quarantine Zone
Department of Agriculture —
[NOTE - 11/24/2021: this dataset supersedes an earlier version https://doi.org/10.15482/USDA.ADC/1518654 ] Data sources. Time series data on cattle fever tick... -
Federal
<i>Salmonella enterica </i>pangenome graph and variant call data for 539,283 genomes
Department of Agriculture —
Salmonella pangenome graph and variant call data for 539,283 genomesDescription:Salmonella enterica causes human disease and decreases agricultural production. The... -
Federal
NUOnet (Nutrient Use and Outcome Network) database
Department of Agriculture —
NUOnet Vision: Efficient use of nutrients to optimize production and product quality of food for animals and humans, fuel and fiber in a sustainable manner that... -
Federal
Data from: Genome-wide association mapping of resistance to the foliar diseases septoria nodorum blotch and tan spot in a global winter wheat collection
Department of Agriculture —
Phenotypic Data A subset of 264 lines from the National Small Grains Collection global hexaploid winter wheat germplasm collection was evaluated under controlled... -
Federal
Data from: Where Flowers Bloom, so do Downy Mildews: New Species and New Records of <i>Hyaloperonospora</i>, <i>Peronospora</i>, and <i>Plasmopara</i> Species on Ornamental and Wild Plants in the United States
Department of Agriculture —
Downy mildews are biotrophic plant pathogens in the family Peronosporaceae (Peronosporales, Oomycota) of high value crops which can cause significant damage and... -
Federal
Data from: Detection of Vesicular Stomatitis Virus Indiana from Insects Collected during the 2020 Outbreak in Kansas, USA
Department of Agriculture —
Vesicular stomatitis (VS) is a reportable viral disease which affects horses, cattle, and pigs in the Americas. Outbreaks of vesicular stomatitis virus New Jersey... -
Federal
Data from: Validation of a real-time quaking-induced conversion (RT-QuIC) assay protocol to detect chronic wasting disease using rectal mucosa of naturally infected, pre-clinical white-tailed deer (<i>Odocoileus virginianus</i>)
Department of Agriculture —
Purpose of the study:The diagnostic performance of a standardized RT-QuIC protocol using two sources of assay substrate was studied for detecting chronic wasting... -
Federal
Single-cell RNA sequencing data and resources from blood and milk immune cells of Holstein cattle with chronic mastitis caused by experimental <i>Staphylococcus aureus</i> infection
Department of Agriculture —
This online resource provides supplementary items used to analyze data in the work, "Single-cell RNA sequencing characterization of Holstein cattle blood and milk... -
Federal
Data from: Antigenic distance between North American swine and human seasonal H3N2 influenza A viruses as an indication of zoonotic risk to humans
Department of Agriculture —
An investigation of antigenic relationships between North American swine H3N2 influenza A viruses (IAV) and human seasonal vaccine strains was conducted to assess the... -
Federal
Data from: Association mapping of resistance to tan spot in the Global Durum Panel
Department of Agriculture —
Phenotypic data: A total of 510 lines from the global durum panel (GDP) were evaluated for reaction to five isolates of the fungal pathogen Pyrenophora tritici-... -
Federal
Data From: The 1014F knockdown resistance mutation is not a strong correlate of phenotypic resistance to pyrethroids in Florida populations of <i>Culex quinquefasciatus</i>
Department of Agriculture —
Culex quinquefasciatus is an important target for vector control because of its ability to transmit pathogens that cause disease. Most populations are resistant to... -
Federal
Data and code from: Cover crop and crop rotation effects on tissue and soil population dynamics of Macrophomina phaseolina and yield in no-till system - V2
Department of Agriculture —
[Note 2023-08-14 - Supersedes version 1, https://doi.org/10.15482/USDA.ADC/1528086 ] This dataset contains all code and data necessary to reproduce the analyses in... -
Federal
Data from: The reference transcriptome of the adult female biting midge (Culicoides sonorensis) and differential gene expression profiling during teneral, blood, and sucrose feeding conditions
Department of Agriculture —
Deep sequencing technologies were used to construct the first adult female Culicoides sonorensis reference transcriptome. Genetic and genomic tools for Culicoides... -
Federal
Data and code from: Comparison of in-field and laboratory-based phenotyping methods for evaluation of aflatoxin accumulation in maize inbred lines
Department of Agriculture —
This dataset contains all data and R code, in RMarkdown notebook format, needed to reproduce all statistical analysis, figures, and tables in the manuscript:Jeffers,... -
Federal
Data from: Canopy closure, yield, and quality under heterogeneous plant spacing in sunflower
Department of Agriculture —
AbstractDeviation from uniform target plant population density in sunflower (Helianthus annuus L.) production may negatively affect canopy closure, yield, and grain... -
Federal
Data from: Solenopsis invicta Viruses and Kneallhazia solenopsae in Tennessee Imported Fire Ant (Hymenoptera: Formicidae) Populations
Department of Agriculture —
The dataset contains the geographic occurrence of Kneallhazia solenopsae (Knell, Allen & Hazard) (Microsporidia: Burenellidae) (formerly Thelohania solenopsae... -
Federal
Data and code from: Severity of charcoal rot disease in soybean genotypes inoculated with <i>Macrophomina phaseolina</i> isolates differs among growth environments
Department of Agriculture —
This dataset includes all the raw data and all the R statistical software code that we used to analyze the data and produce all the outputs that are in the figures,...