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Sialic acid on avian erythrocytes

Metadata Updated: November 12, 2020

Understanding variation in physiological traits across taxa is a central question in evolutionary biology that has wide-ranging implications in biomedicine, disease ecology, and environmental protection. Sialic acid (Sia), and in particular, 5-N-acetylneuraminic acid (Neu5Ac), is chemically bound to galactose and the underlying glycan via α2–3 or α2–6 glycosidic linkage (i.e., Siaα2–3Galactose or Siaα2–6Galactose), conferring two different cell surface structures that affects cell to cell communication and interactions with foreign agents including microparasites and toxins. As an initial step towards understanding variation of Sia across the class Aves, we collected red blood cells (RBCs or erythrocytes) and measured Sia quantity in 76 species and 340 individuals using HPLC-MS/MS and glycosidic linkage type in 24 species and 105 individuals using hemagglutination assay. Although Sia quantity did not, α2–6 glycosidic linkage did exhibit a discernable phylogenetic pattern as evaluated by a phylogenetic signal (λ) value of 0.7. Sia quantity appeared to be higher in after hatch year birds than hatch year birds (P < 0.05); moreover, ~80% of the measured Sia across all individuals or species was expressed by ~20% of the individuals or species. Lastly, as expected, we detected a minimal presence of 5-N-glycolylneuraminic acid in the avian RBCs tested. These data provide novel insights and a large baseline dataset for further study on the variability of Sia in the class Aves which might be useful for understanding Sia dependent processes in birds. This dataset is not publicly accessible because: These data are not EPA-owned. It can be accessed through the following means: The data can be accessed by contacting the corresponding author of the manuscript. The corresponding author is Mark Jankowski (jankowski.mark@epa.gov). Alternatively, the data can be accessed by contacting the principle investigator of the funding entity, Jeanne Fair (jmfair@lanl.gov). Format: As described in the manuscript, several hundred birds were sampled to determine the quantity of sialic acid and the glycosidic linkage type present on the blood cell surface of those sampled birds. The information was used to summarize the variation of sialic acid on avian red blood cells from an individual and a phylogenetic perspective. Therefore, the dataset includes all sample identification information including date and location of sample acquisition, bird taxonomic information, and sialic acid results. Citation information for this dataset can be found in the EDG's Metadata Reference Information section and Data.gov's References section.

Access & Use Information

Public: This dataset is intended for public access and use. License: See this page for license information.

Downloads & Resources

No file downloads have been provided. The publisher may provide downloads in the future or they may be available from their other links.

References

https://dx.doi.org/10.1016/j.cbpb.2019.110336

Dates

Metadata Created Date November 12, 2020
Metadata Updated Date November 12, 2020

Metadata Source

Harvested from EPA ScienceHub

Additional Metadata

Resource Type Dataset
Metadata Created Date November 12, 2020
Metadata Updated Date November 12, 2020
Publisher U.S. Environmental Protection Agency
Maintainer
Identifier https://doi.org/10.23719/1518766
Data Last Modified 2019-08-22
Public Access Level public
Bureau Code 020:00
Schema Version https://project-open-data.cio.gov/v1.1/schema
Harvest Object Id f46f2c19-e338-4cb7-a6dd-5d4a620da7a4
Harvest Source Id 04b59eaf-ae53-4066-93db-80f2ed0df446
Harvest Source Title EPA ScienceHub
License https://pasteur.epa.gov/license/sciencehub-license-non-epa-generated.html
Program Code 020:000
Publisher Hierarchy U.S. Government > U.S. Environmental Protection Agency
Related Documents https://dx.doi.org/10.1016/j.cbpb.2019.110336
Source Datajson Identifier True
Source Hash dab4bd07f673a3cd0a3dd903deb111f592d2dd9b
Source Schema Version 1.1

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