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    • RNAseq data for eye, gill, intestine, and liver tissues from cultured juvenile black carp (Mylopharyngodon piceus)

    Metadata Updated: September 12, 2025

    Intact laboratory-cultured juvenile black carp were dissected, and eyes, gills, intestine, and liver from were collected for transcriptomic analysis. Total RNA was extracted using the RNeasy kit (Qiagen), and the RNA quality and quantity were evaluated using the QIAxcel RNA kit. The RNA-Seq library was prepared from mRNA using a TruSeq Stranded mRNA kit (Illumina), and the library was analyzed in paired-read sequencing for 100-bp with 50 million reads per sample in the NovaSeq 6000 S4 Flow Cell system (Illumina). Sequence data are stored on the NCBI Sequence Read Archive (SRA, https://www.ncbi.nlm.nih.gov/sra), under bioproject accession number PRJNA1221815: Transcriptomics in Black carp. Biosample accession numbers are SAMN46752430 through SAMN46752449.

    Access & Use Information

    Public: This dataset is intended for public access and use. License: No license information was provided. If this work was prepared by an officer or employee of the United States government as part of that person's official duties it is considered a U.S. Government Work.

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    Dates

    Metadata Created Date September 12, 2025
    Metadata Updated Date September 12, 2025

    Metadata Source

    Harvested from DOI USGS DCAT-US

    Other Data Resources

    Additional Metadata

    Resource Type Dataset
    Metadata Created Date September 12, 2025
    Metadata Updated Date September 12, 2025
    Publisher U.S. Geological Survey
    Maintainer
    Identifier http://datainventory.doi.gov/id/dataset/usgs-7557101b-9322-4923-a077-11a02e547a94
    Data Last Modified 2025-03-04T00:00:00Z
    Category geospatial
    Public Access Level public
    Bureau Code 010:12
    Metadata Context https://project-open-data.cio.gov/v1.1/schema/catalog.jsonld
    Metadata Catalog ID https://ddi.doi.gov/usgs-data.json
    Schema Version https://project-open-data.cio.gov/v1.1/schema
    Catalog Describedby https://project-open-data.cio.gov/v1.1/schema/catalog.json
    Harvest Object Id 04aa7cce-2680-4ab7-a1b0-d2cee06223ca
    Harvest Source Id 2b80d118-ab3a-48ba-bd93-996bbacefac2
    Harvest Source Title DOI USGS DCAT-US
    Metadata Type geospatial
    Old Spatial -92.284312, 38.910784, -92.274450, 38.912612
    Source Datajson Identifier True
    Source Hash 77e5fcae1c7639989e80885390d847040d27f23c70aa92d5e64aaa16a8870a10
    Source Schema Version 1.1
    Spatial {"type": "Polygon", "coordinates": -92.284312, 38.910784, -92.284312, 38.912612, -92.274450, 38.912612, -92.274450, 38.910784, -92.284312, 38.910784}

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