As the climate warms and dry periods become more extreme, shallow groundwater discharge is generally becoming a less reliable source of streamflow while deep groundwater discharge remains a more resilient source. The implications of shifts in the relative balance of shallow and deep groundwater discharge sources are profound in gaining streams. These different sources exert critical controls on stream temperature and water quality as influenced by legacy groundwater contaminant transport. Groundwater discharge flux rates over time were used for the inference of source groundwater characteristics to prominent riverbank groundwater discharge faces along the mainstem Farmington River, CT USA. To estimate groundwater discharge rates, we deployed sediment temperature loggers (iButton #DS1922L, Maxim Integrated, Inc., San Jose, CA, USA) in vertical profilers installed directly into mapped preferential groundwater discharge points across extensive riverbank discharge face features.Temperature data contained in this release were collected from June 24 to November 5, 2020, at 40 distinct discharge point riverbank locations, similar to those described by Barclay et al. (2022) and Briggs et al. (2022). Saturated sediment thermal conductivity and heat capacity were measured in-situ with a TEMPOS Thermal Property Analyzer (TEMPOS, Meter Group, Inc., Pullman, WA, USA) at multiple points across each riverbank discharge face to aid in estimating groundwater discharge flux rates. Barclay, J. R., Briggs, M. A., Moore, E. M., Starn, J. J., Hanson, A. E. H., & Helton, A. M. (2022). Where groundwater seeps: Evaluating modeled groundwater discharge patterns with thermal infrared surveys at the river-network scale. Advances in Water Resources, 160. https://doi.org/10.1016/j.advwatres.2021.104108 Briggs, M. A., Jackson, K. E., Liu, F., Moore, E. M., Bisson, A., & Helton, A. M. (2022). Exploring Local Riverbank Sediment Controls on the Occurrence of Preferential Groundwater Discharge Points. Water, 14(1). https://doi.org/10.3390/w14010011