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    • Reference genome for Phragmites australis (Poaceae, subfamily Arundinoideae) and comparison of North American invasive genotype (ssp. australis) and native (ssp. americanus)

    Metadata Updated: July 6, 2024

    These data represent the first reference genome for the invasive Phragmites australis ssp. australis (1.14 giga base pairs (Gbp)), as well as output from comparative genomic and transcriptomic analyses for invasive and native genotypes coexisting in the Great Lakes region of North America. Genome sequencing data used tillers and associated rhizome tissues collected from a single P. australis patch at the Ottawa National Wildlife Refuge near Toledo, Ohio, USA. Transcriptome analyses were produced from samples collected from three invasive and three native genotype P. australis patches from four sites around the Great Lakes in Michigan and Ohio, USA.

    Access & Use Information

    Public: This dataset is intended for public access and use. License: No license information was provided. If this work was prepared by an officer or employee of the United States government as part of that person's official duties it is considered a U.S. Government Work.

    Downloads & Resources

    Dates

    Metadata Created Date June 1, 2023
    Metadata Updated Date July 6, 2024

    Metadata Source

    Harvested from DOI EDI

    Other Data Resources

    Additional Metadata

    Resource Type Dataset
    Metadata Created Date June 1, 2023
    Metadata Updated Date July 6, 2024
    Publisher U.S. Geological Survey
    Maintainer
    @Id http://datainventory.doi.gov/id/dataset/2aa5574007f208bb6bd29726ae1ceaef
    Identifier USGS:61253eefd34e40dd9c03f2f5
    Data Last Modified 20220420
    Category geospatial
    Public Access Level public
    Bureau Code 010:12
    Metadata Context https://project-open-data.cio.gov/v1.1/schema/catalog.jsonld
    Metadata Catalog ID https://datainventory.doi.gov/data.json
    Schema Version https://project-open-data.cio.gov/v1.1/schema
    Catalog Describedby https://project-open-data.cio.gov/v1.1/schema/catalog.json
    Harvest Object Id e237327e-4fc9-4ba8-9717-7336f23b5c7e
    Harvest Source Id 52bfcc16-6e15-478f-809a-b1bc76f1aeda
    Harvest Source Title DOI EDI
    Metadata Type geospatial
    Old Spatial -89.0552,39.8929,-79.1455,46.6344
    Publisher Hierarchy White House > U.S. Department of the Interior > U.S. Geological Survey
    Source Datajson Identifier True
    Source Hash c4839076ca63866c7a3f1340ca1ea2499a08f7bb13d8eb77bd021d254d955acc
    Source Schema Version 1.1
    Spatial {"type": "Polygon", "coordinates": -89.0552, 39.8929, -89.0552, 46.6344, -79.1455, 46.6344, -79.1455, 39.8929, -89.0552, 39.8929}

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