ORD-026626: Assessment of the performance of the TGx-DDI biomarker to detect DNA damage-inducing agents using quantitative RT- PCR in TK6 cells
The dataset shows the results of the Running Fisher test between the TGx-DDI biomarker and each of the qPCR-generated gene lists from chemical treatments in TK6 cells. The results are divided into training and test sets.
This dataset is associated with the following publication:
Cho, E., J. Buick, A. Williams, R. Chen, H. Li, C. Corton, A. Fornace, J. Aubrecht, and C. Yauk. Assessment of the performance of the TGx-DDI biomarker to detect DNA damage-inducing agents using quantitative RT- PCR in TK6 cells. ENVIRONMENTAL AND MOLECULAR MUTAGENESIS. John Wiley & Sons, Inc, Hoboken, NJ, USA, 60(2): 122-133, (2019).
Resources
1 resource available
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Data submission for A-4tmz.xlsx
APPLICATION/VND.OPENXMLFORMATS-OFFICEDOCUMENT.SPREADSHEETML.SHEET
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Complete Metadata
| @type | dcat:Dataset |
|---|---|
| accessLevel | public |
| bureauCode |
[ "020:00" ] |
| contactPoint |
{ "fn": "Jon Corton", "hasEmail": "mailto:corton.chris@epa.gov" } |
| description | The dataset shows the results of the Running Fisher test between the TGx-DDI biomarker and each of the qPCR-generated gene lists from chemical treatments in TK6 cells. The results are divided into training and test sets. This dataset is associated with the following publication: Cho, E., J. Buick, A. Williams, R. Chen, H. Li, C. Corton, A. Fornace, J. Aubrecht, and C. Yauk. Assessment of the performance of the TGx-DDI biomarker to detect DNA damage-inducing agents using quantitative RT- PCR in TK6 cells. ENVIRONMENTAL AND MOLECULAR MUTAGENESIS. John Wiley & Sons, Inc, Hoboken, NJ, USA, 60(2): 122-133, (2019). |
| distribution |
[ { "title": "Data submission for A-4tmz.xlsx", "mediaType": "application/vnd.openxmlformats-officedocument.spreadsheetml.sheet", "downloadURL": "https://pasteur.epa.gov/uploads/10.23719/1500453/Data%20submission%20for%20A-4tmz.xlsx" } ] |
| identifier | https://doi.org/10.23719/1500453 |
| keyword |
[ "TGx-DDI", "biomarker", "genotoxicity testing", "high throughput testing" ] |
| license | https://pasteur.epa.gov/license/sciencehub-license.html |
| modified | 2018-05-15 |
| programCode |
[ "020:000" ] |
| publisher |
{ "name": "U.S. EPA Office of Research and Development (ORD)", "subOrganizationOf": { "name": "U.S. Environmental Protection Agency", "subOrganizationOf": { "name": "U.S. Government" } } } |
| references |
[ "https://doi.org/10.1002/em.22257" ] |
| rights |
null
|
| title | ORD-026626: Assessment of the performance of the TGx-DDI biomarker to detect DNA damage-inducing agents using quantitative RT- PCR in TK6 cells |
