Omics Standard Operating Procedures
This living document will illustrate Standard Operating Procedures (SOPs) for sampling biofilm material from reverse osmosis (RO) membrane modules. The SOPs will empower the NAWI research community to apply omics tools (e.g., time-series metagenomic, meta-transcriptomic, metaproteomic and metabolomic workflows) to fundamentally understand biofilm formation with unprecedented resolution (e.g., the transition from innocuous to detrimental biofilm) and mitigate biofouling in water treatment and distribution systems.
Resources
1 resource available
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Development of SOPs for Omics Analyses of Microbial Biofilms on RO Membranes.docx
DOCX
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Complete Metadata
| @type | dcat:Dataset |
|---|---|
| accessLevel | public |
| bureauCode |
[
"019:20"
]
|
| contactPoint |
{
"fn": "Frank Loeffler",
"@type": "vcard:Contact",
"hasEmail": "mailto:frank.loeffler@utk.edu"
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|
| dataQuality |
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| description | This living document will illustrate Standard Operating Procedures (SOPs) for sampling biofilm material from reverse osmosis (RO) membrane modules. The SOPs will empower the NAWI research community to apply omics tools (e.g., time-series metagenomic, meta-transcriptomic, metaproteomic and metabolomic workflows) to fundamentally understand biofilm formation with unprecedented resolution (e.g., the transition from innocuous to detrimental biofilm) and mitigate biofouling in water treatment and distribution systems. |
| distribution |
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{
"@type": "dcat:Distribution",
"title": "Development of SOPs for Omics Analyses of Microbial Biofilms on RO Membranes.docx",
"format": "docx",
"mediaType": "application/vnd.openxmlformats-officedocument.wordprocessingml.document",
"description": "Living document of SOPs for sampling RO membranes for omic tools applications",
"downloadURL": "https://data.openei.org/files/6467/Omics%20SOPs%20development%20v01-02-2021_3.docx"
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|
| identifier | https://data.openei.org/submissions/6467 |
| issued | 2021-01-18T07:00:00Z |
| keyword |
[
"Biofilms",
"NAWI",
"Omics analyses",
"RO",
"SOPs",
"biofilm",
"biofouling",
"desalination",
"detrimental",
"innocuous",
"membrane",
"meta-transcriptomic",
"metabolomic",
"metagenomic",
"metaproteomic",
"omic",
"omics",
"reverse osmosis",
"time-series",
"water"
]
|
| landingPage | https://data.openei.org/submissions/6467 |
| license | https://creativecommons.org/licenses/by/4.0/ |
| modified | 2025-08-13T13:59:53Z |
| programCode |
[
"019:000",
"019:009"
]
|
| projectNumber |
"36496"
|
| projectTitle | NAWI Integrated Data and Analysis |
| publisher |
{
"name": "Oak Ridge National Laboratory",
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|
| title | Omics Standard Operating Procedures |
