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NOAA RESTORE Science Program: Ecosystem modeling to improve fisheries management in the Gulf of Mexico: model inputs and outputs for the West Florida Shelf, 1985-01-01 to 2018-12-31 (NCEI Accession 0242339)

Published by NOAA National Centers for Environmental Information | National Oceanic and Atmospheric Administration, Department of Commerce | Catalog Last Checked: August 27, 2026 at 09:01 PM | Dataset Last Updated: January 12, 2022 at 12:00 AM
This dataset is a collection of files containing the necessary inputs to and relevant outputs from the West Florida Shelf ecosystem model used to estimate mortality rates on valuable reef fish species, and ecosystem indicators to estimate red tide mortality rates events. The model was developed using the Ecopath with Ecosim and Ecospace modeling software package. The spatial extent of the model is 25° to 30.5° N and 81° to 87.5° W and simulations were run in hindcast from 1985 to 2018 at a monthly timestep. Parameters include biomass, consumption, mortality, diet, landings, discards, dispersal rates, ecosystem indicators, environmental preferences, and habitat maps for 83 species or functional groups included in the model. Each input or output parameter type is included as its own csv or netcdf file with informative names.

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27 resources available

  • NCEI Dataset Landing Page

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  • Descriptive Information

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  • HTTPS

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  • FTP

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  • Ecosystem-based evaluation of fishery policy options and tradeoffs on the West Florida Shelf

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  • West Florida Shelf Ecosystem Model

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  • https://doi.org/10.1080/19425120.2014.966216

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  • https://doi.org/10.1080/03632415.2017.1340273

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  • https://doi.org/10.1016/j.jmarsys.2005.09.016

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  • https://doi.org/10.1016/j.ecolmodel.2003.09.003

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  • https://doi.org/10.1016/j.rse.2005.05.013

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  • https://doi.org/10.1016/j.hal.2008.11.010

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  • https://doi.org/10.1016/j.ecolmodel.2003.09.015

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  • Red tide mortality on gag grouper from 2002-2018 generated by an Ecospace model of the West Florida Shelf

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  • https://doi.org/10.25921/mx4t-r574

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  • SEAMAP trawl and bottom longline data

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  • MODIS Aqua nFLH satellite data

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  • https://www.ncei.noaa.gov/archive/accession/0120767

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  • Gulf of Mexico fisheries stock assessments

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  • Ecopath with Ecosim

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  • RedTideVIS: rShiny app for data visualization

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  • Ecosystem Modeling for Fisheries Management in the Gulf of Mexico

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  • RESTORE Project: Ecosystem Modeling to Improve Fisheries Management in the Gulf of Mexico

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  • https://www.fisheries.noaa.gov/inport/item/65437

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  • https://doi.org/10.25921/q1zt-fs45

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  • GCMD Keyword Forum Page

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  • NCEI Contact Information

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0242339 biological data BIOMASS Fish INVERTEBRATE SPECIES SALINITY - SURFACE WATER SEA SURFACE TEMPERATURE WATER TEMPERATURE

Complete Metadata
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description This dataset is a collection of files containing the necessary inputs to and relevant outputs from the West Florida Shelf ecosystem model used to estimate mortality rates on valuable reef fish species, and ecosystem indicators to estimate red tide mortality rates events. The model was developed using the Ecopath with Ecosim and Ecospace modeling software package. The spatial extent of the model is 25° to 30.5° N and 81° to 87.5° W and simulations were run in hindcast from 1985 to 2018 at a monthly timestep. Parameters include biomass, consumption, mortality, diet, landings, discards, dispersal rates, ecosystem indicators, environmental preferences, and habitat maps for 83 species or functional groups included in the model. Each input or output parameter type is included as its own csv or netcdf file with informative names.
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identifier https://data.noaa.gov/waf/NOAA/NESDIS/ncei/accessions/iso/xml/0242339.xml
issued 2021-10-25T00:00:00.000+00:00
keyword 
[
  "0242339",
  "biological data",
  "BIOMASS",
  "Fish",
  "INVERTEBRATE SPECIES",
  "SALINITY - SURFACE WATER",
  "SEA SURFACE TEMPERATURE",
  "WATER TEMPERATURE",
  "biological",
  "model output",
  "Florida Fish and Wildlife Conservation Commission",
  "NOAA National Centers for Coastal Ocean Science",
  "NOAA Pacific Islands Fisheries Science Center",
  "NOAA Southeast Fisheries Science Center",
  "The University of Southern Mississippi",
  "University of Florida",
  "NOAA National Centers for Coastal Ocean Science",
  "Coastal Waters of Florida",
  "Gulf of Mexico",
  "oceanography",
  "DOC/NOAA/NMFS > National Marine Fisheries Service, NOAA, U.S. Department of Commerce",
  "DOC/NOAA/NMFS/SEFSC > Southeast Fisheries Science Center, National Marine Fisheries Service, NOAA, U.S. Department of Commerce",
  "DOC/NOAA/NOS/NCCOS > National Centers for Coastal Ocean Science, National Ocean Service, NOAA, U.S. Department of Commerce",
  "NCCOS Sponsored Research > RESTORE Science Program",
  "RESTORE Project, Ecosystem Modeling to Improve Fisheries Management in the Gulf of Mexico",
  "EARTH SCIENCE > BIOLOGICAL CLASSIFICATION",
  "EARTH SCIENCE > BIOLOGICAL CLASSIFICATION > ANIMALS/INVERTEBRATES",
  "EARTH SCIENCE > BIOLOGICAL CLASSIFICATION > ANIMALS/VERTEBRATES > FISH",
  "EARTH SCIENCE > BIOSPHERE > VEGETATION > BIOMASS",
  "EARTH SCIENCE > CLIMATE INDICATORS > ATMOSPHERIC/OCEAN INDICATORS > SURFACE SALINITY",
  "EARTH SCIENCE > OCEANS > OCEAN TEMPERATURE > SEA SURFACE TEMPERATURE",
  "EARTH SCIENCE > OCEANS > OCEAN TEMPERATURE > WATER TEMPERATURE",
  "EARTH SCIENCE > OCEANS > SALINITY/DENSITY > SALINITY",
  "Spanish mackerel adult",
  "Spanish mackerel juv",
  "anthozoans",
  "bivalves",
  "black grouper",
  "black sea bass",
  "blueline tilefish",
  "carnivorous zooplankton",
  "coastal dolphins",
  "coastal piscivores",
  "cobia",
  "demersal omnivores",
  "echinoderms",
  "gag 0",
  "gag 1",
  "gag 2",
  "gag 3",
  "gag 4",
  "gag 5+",
  "gastropods",
  "golden tilefish",
  "goliath grouper",
  "gray triggerfish",
  "greater amberjack",
  "grey snapper",
  "herbivorous zooplankton",
  "hogfish",
  "ichthyoplankton",
  "jellyfish",
  "king mackerel adult",
  "king mackerel juv",
  "large crabs",
  "large demersal sharks",
  "lionfish adult",
  "lionfish juv",
  "macroalgae",
  "medium reef omnivores",
  "meiobenthos",
  "microbes",
  "microphytobenthos",
  "mobile epifauna",
  "mullet",
  "nearshore demersal carnivores",
  "nearshore small pelagics",
  "offshore demersal carnivores",
  "offshore dolphins",
  "offshore small pelagics",
  "omnivorous zooplankton",
  "other Deep Water Grouper (DWG)",
  "other Shallow Water Grouper (SWG)",
  "other snapper",
  "pelagic piscivores",
  "pelagic sharks",
  "phytoplankton",
  "red grouper 0",
  "red grouper 1",
  "red grouper 2",
  "red grouper 3",
  "red grouper 4",
  "red grouper 5+",
  "red porgy",
  "red snapper 0",
  "red snapper 1-2",
  "red snapper 3+",
  "reef carnivores",
  "reef crustacean eaters",
  "reef invertivores",
  "reef planktivores",
  "sardine herring scad",
  "scamp",
  "seabirds",
  "seagrass",
  "sediment detritus",
  "sessile epibenthos",
  "shrimp",
  "small infauna",
  "small reef omnivores",
  "small sharks and rays",
  "squid",
  "stomatopods",
  "vermilion snapper",
  "water column detritus",
  "yellowedge grouper",
  "Model",
  "Ecosystem model",
  "Karenia brevis",
  "Red tide",
  "WFS Ecospace model",
  "Models/Analyses > Data Analyses > Environmental Modeling",
  "OCEAN > ATLANTIC OCEAN > NORTH ATLANTIC OCEAN",
  "OCEAN > ATLANTIC OCEAN > NORTH ATLANTIC OCEAN > GULF OF AMERICA",
  "OCEAN > ATLANTIC OCEAN > NORTH ATLANTIC OCEAN > GULF OF MEXICO",
  "Waterbodies > Gulf of Mexico",
  "West Florida Shelf",
  "0P4L5E"
]
landingPage https://www.ncei.noaa.gov/contact
language 
[]
license https://creativecommons.org/publicdomain/zero/1.0/
modified 2022-01-12T00:00:00.000+00:00
publisher 
{
  "name": "NOAA National Centers for Environmental Information",
  "@type": "org:Organization"
}
references 
[
  "https://ufl-flvc.primo.exlibrisgroup.com/permalink/01FALSC_UFL/175ga98/alma990330005590306597",
  "https://ufdc.ufl.edu/IR00011604/00001",
  "https://doi.org/10.1080/19425120.2014.966216",
  "https://doi.org/10.1080/03632415.2017.1340273",
  "https://doi.org/10.1016/j.jmarsys.2005.09.016",
  "https://doi.org/10.1016/j.ecolmodel.2003.09.003",
  "https://doi.org/10.1016/j.rse.2005.05.013",
  "https://doi.org/10.1016/j.hal.2008.11.010",
  "https://doi.org/10.1016/j.ecolmodel.2003.09.015",
  "http://sedarweb.org/docs/wpapers/S72_WP_01_red_tide_Mortality_Ecospace_v3.pdf",
  "https://doi.org/10.25921/mx4t-r574",
  "https://seamap.gsmfc.org/index.php",
  "https://giovanni.gsfc.nasa.gov/giovanni/",
  "https://www.ncei.noaa.gov/archive/accession/0120767",
  "http://sedarweb.org/",
  "https://ecopath.org/",
  "https://redtidevis.shinyapps.io/redtideapp/",
  "https://ncbs.ifas.ufl.edu/gulf-mexico-ecosystem-modeling/",
  "https://restoreactscienceprogram.noaa.gov/projects/fisheries-ecosystem-models",
  "https://www.fisheries.noaa.gov/inport/item/65437",
  "https://doi.org/10.25921/q1zt-fs45"
]
rights otherRestrictions
spatial -80.9166,24.9156,-87.5833,30.5823
temporal 1985-01-01T00:00:00+00:00/2018-12-31T00:00:00+00:00
theme 
[
  "geospatial"
]
title NOAA RESTORE Science Program: Ecosystem modeling to improve fisheries management in the Gulf of Mexico: model inputs and outputs for the West Florida Shelf, 1985-01-01 to 2018-12-31 (NCEI Accession 0242339)

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