Neosho Madtom (Noturus placidus) short read archive and whole genome sequence data
Whole genome sequence data from ten Neosho madtom originating from three geographically separated populations. A Neosho madtom genome was de novo assembled and genome size and content were assessed. Genomic DNA was used to construct one small insert paired-end library per fish with an approximate insert size of 300 bp. The library was constructed following the manufacturer’s protocol with reagents supplied in Illumina’s TruSeq DNA PCR-Free sample preparation kit (#FC-121-3001).
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Complete Metadata
| @type | dcat:Dataset |
|---|---|
| accessLevel | public |
| bureauCode |
[ "010:12" ] |
| contactPoint |
{ "fn": "Mark L Wildhaber", "@type": "vcard:Contact", "hasEmail": "mailto:mwildhaber@usgs.gov" } |
| description | Whole genome sequence data from ten Neosho madtom originating from three geographically separated populations. A Neosho madtom genome was de novo assembled and genome size and content were assessed. Genomic DNA was used to construct one small insert paired-end library per fish with an approximate insert size of 300 bp. The library was constructed following the manufacturer’s protocol with reagents supplied in Illumina’s TruSeq DNA PCR-Free sample preparation kit (#FC-121-3001). |
| distribution |
[ { "@type": "dcat:Distribution", "title": "Digital Data", "format": "XML", "accessURL": "https://doi.org/10.5066/P9MAPT9T", "mediaType": "application/http", "description": "Landing page for access to the data" }, { "@type": "dcat:Distribution", "title": "Original Metadata", "format": "XML", "mediaType": "text/xml", "description": "The metadata original format", "downloadURL": "https://data.usgs.gov/datacatalog/metadata/USGS.621cdcfed34ec739b2de39cc.xml" } ] |
| identifier | http://datainventory.doi.gov/id/dataset/USGS_621cdcfed34ec739b2de39cc |
| keyword |
[ "Aquatic biology", "Cottonwood River", "Genetics", "Kansas", "Missouri", "Neosho River", "Oklahoma", "USGS:621cdcfed34ec739b2de39cc", "biota", "genome assembly", "madtom" ] |
| modified | 2022-02-28T00:00:00Z |
| publisher |
{ "name": "U.S. Geological Survey", "@type": "org:Organization" } |
| spatial | -96.492999999999, 36.9405, -94.997899999998, 38.5162 |
| theme |
[ "geospatial" ] |
| title | Neosho Madtom (Noturus placidus) short read archive and whole genome sequence data |
