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National Coral Reef Monitoring Program: Benthic Cover Derived from Analysis of Benthic Images Collected for Climate Stations across the Hawaiian Archipelago since 2013

Published by Pacific Islands Fisheries Science Center | National Oceanic and Atmospheric Administration, Department of Commerce | Catalog Last Checked: August 02, 2026 at 11:21 PM | Dataset Last Updated: January 01, 2021 at 12:00 AM
This data has been combined into a US Pacific-wide InPort record: https://www.fisheries.noaa.gov/inport/item/78600. The data described here result from benthic photo-quadrat surveys conducted along transects at climate stations and permanent sites identified by the Ocean and Climate Change team across the Hawaiian archipelago since 2013 . Benthic habitat imagery were quantitatively analyzed using Coral Point Count with Excel extensions (CPCe; Kohler and Gill, 2006) software from 2010-2014 and a web-based annotation tool called CoralNet (Beijbom et al. 2016) from 2015 to present. In general, images are analyzed to produce three functional group levels of benthic cover: Tier 1 (e.g., hard coral, soft coral, macroalgae, turf algae, etc.), Tier 2 (e.g., Hard Coral = massive, branching, foliose, encrusting, etc.; Macroalgae = upright macroalgae, encrusting macroalgae, bluegreen macroalgae, and Halimeda, etc.), and Tier 3 (e.g., Hard Coral = Astreopora sp, Favia sp, Pocillopora, etc.; Macroalgae = Caulerpa sp, Dictyosphaeria sp, Padina sp, etc.). Climate stations are 3-4 sites per island that were selected in a stratified random fashion to be roughly equally spaced around the island, along the 15 m contour, on hard bottom, and at least 1 km away from a river mouth or embayment. Once selected we assess multiple features of the coral reef environment including in-situ temperature (STR), seawater carbonate, net carbonate accretion (CAU), and bioerosion (BMU). In 2013 and 2016, cryptobiota diversity (ARMS) was also assessed. These data can be accessed online via the NOAA National Centers for Environmental Information (NCEI) Ocean Archive.

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743 National Coral Reef Monitoring Program Numeric Data Sets > Benthic EARTH SCIENCE > Biosphere > Aquatic Habitat > Benthic Habitat EARTH SCIENCE > Biosphere > Aquatic Habitat > Reef Habitat EARTH SCIENCE > Biosphere > Microbiota > Blue-green Algae EARTH SCIENCE > Biosphere > Vegetation > Algae > Algal Cover EARTH SCIENCE > Biosphere > Vegetation > Algae > Crustose Coralline Algae

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@type dcat:Dataset
accessLevel non-public
contactPoint 
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describedByType application/octet-steam
description This data has been combined into a US Pacific-wide InPort record: https://www.fisheries.noaa.gov/inport/item/78600. The data described here result from benthic photo-quadrat surveys conducted along transects at climate stations and permanent sites identified by the Ocean and Climate Change team across the Hawaiian archipelago since 2013 . Benthic habitat imagery were quantitatively analyzed using Coral Point Count with Excel extensions (CPCe; Kohler and Gill, 2006) software from 2010-2014 and a web-based annotation tool called CoralNet (Beijbom et al. 2016) from 2015 to present. In general, images are analyzed to produce three functional group levels of benthic cover: Tier 1 (e.g., hard coral, soft coral, macroalgae, turf algae, etc.), Tier 2 (e.g., Hard Coral = massive, branching, foliose, encrusting, etc.; Macroalgae = upright macroalgae, encrusting macroalgae, bluegreen macroalgae, and Halimeda, etc.), and Tier 3 (e.g., Hard Coral = Astreopora sp, Favia sp, Pocillopora, etc.; Macroalgae = Caulerpa sp, Dictyosphaeria sp, Padina sp, etc.). Climate stations are 3-4 sites per island that were selected in a stratified random fashion to be roughly equally spaced around the island, along the 15 m contour, on hard bottom, and at least 1 km away from a river mouth or embayment. Once selected we assess multiple features of the coral reef environment including in-situ temperature (STR), seawater carbonate, net carbonate accretion (CAU), and bioerosion (BMU). In 2013 and 2016, cryptobiota diversity (ARMS) was also assessed. These data can be accessed online via the NOAA National Centers for Environmental Information (NCEI) Ocean Archive.
distribution 
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    "description": "Image analysis data derived from photoquadrat benthic images at NCRMP climate stations and permanent sites across the Hawaiian archipelago in 2013 by the NOAA Coral Reef Ecosystem Program (CREP), now know as the Ecosystem Sciences Division (ESD).",
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identifier https://data.noaa.gov/waf/NOAA/nmfs/pifsc/iso/xml/36146.xml
issued 2016-01-01T00:00:00.000+00:00
keyword 
[
  "743",
  "National Coral Reef Monitoring Program",
  "Numeric Data Sets > Benthic",
  "EARTH SCIENCE > Biosphere > Aquatic Habitat > Benthic Habitat",
  "EARTH SCIENCE > Biosphere > Aquatic Habitat > Reef Habitat",
  "EARTH SCIENCE > Biosphere > Microbiota > Blue-green Algae",
  "EARTH SCIENCE > Biosphere > Vegetation > Algae > Algal Cover",
  "EARTH SCIENCE > Biosphere > Vegetation > Algae > Crustose Coralline Algae",
  "EARTH SCIENCE > Biosphere > Vegetation > Algae > Encrusting Macroalgae",
  "EARTH SCIENCE > Biosphere > Vegetation > Algae > Turf Algae",
  "EARTH SCIENCE > Biosphere > Zoology > Corals",
  "EARTH SCIENCE > Biosphere > Zoology > Corals > Reef Monitoring and Assessment",
  "EARTH SCIENCE > Biosphere > Zoology > Corals > Reef Monitoring and Assessment > Baseline studies",
  "EARTH SCIENCE > Biosphere > Zoology > Corals > Reef Monitoring and Assessment > Benthos Analysis",
  "EARTH SCIENCE > Biosphere > Zoology > Corals > Reef Monitoring and Assessment > Benthos Analysis > Quadrat Monitoring > Photograph Analysis",
  "EARTH SCIENCE > Biosphere > Zoology > Corals > Reef Monitoring and Assessment > Benthos Analysis > Transect Monitoring",
  "EARTH SCIENCE > Biosphere > Zoology > Corals > Reef Monitoring and Assessment > Benthos Analysis > Transect Monitoring > Belt Transect",
  "EARTH SCIENCE > Biosphere > Zoology > Corals > Reef Monitoring and Assessment > Benthos Analysis > Transect Monitoring > Point Counts",
  "EARTH SCIENCE > Biosphere > Zoology > Corals > Reef Monitoring and Assessment > In Situ Biological",
  "EARTH SCIENCE > Biosphere > Zoology > Corals > Reef Monitoring and Assessment > Photographic Analysis",
  "EARTH SCIENCE > Biosphere > Zoology > Corals > Reef Monitoring and Assessment > Rapid Assessment Studies",
  "EARTH SCIENCE > Biosphere > Zoology > Mollusks > Tridacna",
  "EARTH SCIENCE > Biosphere > Zoology > Sponges",
  "EARTH SCIENCE > Oceans > Coastal Processes > Coral Reefs",
  "EARTH SCIENCE > Oceans > Coastal Processes > Coral Reefs > Coral Reef Ecology",
  "EARTH SCIENCE > Oceans > Coastal Processes > Coral Reefs > Coral Reef Ecology > Benthic biology",
  "EARTH SCIENCE > Oceans > Coastal Processes > Coral Reefs > Coral Reef Ecology > Coral Cover",
  "EARTH SCIENCE > Oceans > Coastal Processes > Coral Reefs > Coral Reef Ecology > Hard Coral Cover",
  "EARTH SCIENCE > Oceans > Coastal Processes > Coral Reefs > Coral Reef Ecology > Hard Coral Cover Live percentage",
  "EARTH SCIENCE > Oceans > Coastal Processes > Coral Reefs > Coral Reef Ecology > Octocoral Cover",
  "EARTH SCIENCE > Oceans > Marine Biology > Coral",
  "EARTH SCIENCE > Oceans > Marine Biology > Coral Communities",
  "EARTH SCIENCE > Oceans > Marine Biology > Marine Invertebrates",
  "EARTH SCIENCE > Oceans > Marine Biology > Marine Invertebrates > Macroinvertebrates",
  "EARTH SCIENCE > Oceans > Marine Biology > Marine Plants > Seagrass",
  "REEF AND/OR BOTTOM REGIME - PERCENT COVER",
  "laboratory analyses",
  "HI'IALAKAI",
  "OSCAR ELTON SETTE",
  "RAINIER",
  "CORAL REEF STUDIES",
  "Coral Reef Conservation Program",
  "National Coral Reef Monitoring Program",
  "US DOC; NOAA; NMFS; Pacific Islands Fisheries Science Center; Ecosystem Sciences Division; Coral Reef Ecosystem Program",
  "COUNTRY/TERRITORY > United States of America > Hawaii > Hawaii > Hawaii (21N160W0000)",
  "COUNTRY/TERRITORY > United States of America > Hawaii > Hawaii > Hawaii Island (19N155W0003)",
  "COUNTRY/TERRITORY > United States of America > Hawaii > Hawaii > Kauai Island (22N159W0001)",
  "COUNTRY/TERRITORY > United States of America > Hawaii > Hawaii > Molokai Island (21N157W0001)",
  "COUNTRY/TERRITORY > United States of America > Hawaii > Honolulu > French Frigate Shoals (24N166W0001)",
  "COUNTRY/TERRITORY > United States of America > Hawaii > Honolulu > Kure Atoll (28N178W0001)",
  "COUNTRY/TERRITORY > United States of America > Hawaii > Honolulu > Lisianski Island (25N173W0001)",
  "COUNTRY/TERRITORY > United States of America > Hawaii > Honolulu > Northwestern Hawaiian Islands (28N178W0000)",
  "COUNTRY/TERRITORY > United States of America > Hawaii > Honolulu > Oahu (21N157W0003)",
  "COUNTRY/TERRITORY > United States of America > Hawaii > Honolulu > Pearl and Hermes Reef (27N176W0001)",
  "COUNTRY/TERRITORY > United States of America > Hawaii > Kauai > Niihau Island (21N160W0001)",
  "COUNTRY/TERRITORY > United States of America > Hawaii > Maui > Lanai Island (20N156W0002)",
  "COUNTRY/TERRITORY > United States of America > Hawaii > Maui > Maui Island (20N156W0004)",
  "COUNTRY/TERRITORY > United States of America > Hawaiian Islands (21N157W0027)",
  "OCEAN BASIN > Pacific Ocean > Central Pacific Ocean > Hawaiian Islands (21N157W0027)",
  "OCEAN BASIN > Pacific Ocean > Central Pacific Ocean > Hawaiian Islands > Hawaii > Hawaii (21N160W0000)",
  "OCEAN BASIN > Pacific Ocean > Central Pacific Ocean > Hawaiian Islands > Hawaii Island > Hawaii Island (19N155W0003)",
  "OCEAN BASIN > Pacific Ocean > Central Pacific Ocean > Hawaiian Islands > Kauai Island > Kauai Island (22N159W0001)",
  "OCEAN BASIN > Pacific Ocean > Central Pacific Ocean > Hawaiian Islands > Lanai Island > Lanai Island (20N156W0002)",
  "OCEAN BASIN > Pacific Ocean > Central Pacific Ocean > Hawaiian Islands > Maui Island > Maui Island (20N156W0004)",
  "OCEAN BASIN > Pacific Ocean > Central Pacific Ocean > Hawaiian Islands > Molokai Island > Molokai Island (21N157W0001)",
  "OCEAN BASIN > Pacific Ocean > Central Pacific Ocean > Hawaiian Islands > Niihau Island > Niihau Island (21N160W0001)",
  "OCEAN BASIN > Pacific Ocean > Central Pacific Ocean > Hawaiian Islands > Oahu Island > Oahu (21N157W0003)",
  "OCEAN BASIN > Pacific Ocean > Central Pacific Ocean > Northwestern Hawaiian Islands (28N178W0000)",
  "OCEAN BASIN > Pacific Ocean > Central Pacific Ocean > Northwestern Hawaiian Islands > French Frigate Shoals (24N166W0001)",
  "OCEAN BASIN > Pacific Ocean > Central Pacific Ocean > Northwestern Hawaiian Islands > Kure Atoll (28N178W0001)",
  "OCEAN BASIN > Pacific Ocean > Central Pacific Ocean > Northwestern Hawaiian Islands > Lisianski Island (25N173W0001)",
  "OCEAN BASIN > Pacific Ocean > Central Pacific Ocean > Northwestern Hawaiian Islands > Pearl and Hermes Reef (27N176W0001)",
  "North Pacific Ocean",
  "Papahanaumokuakea Marine National Monument",
  "CRED",
  "CREP",
  "Coral Reef Ecosystem Division",
  "Coral Reef Ecosystem Program",
  "ESD",
  "Ecosystem Sciences Division",
  "PIFSC",
  "Pacific Islands Fisheries Science Center",
  "MHI",
  "Main Hawaiian Islands",
  "NWHI",
  "Northwestern Hawaiian Islands",
  "DOC/NOAA/NMFS/PIFSC > Pacific Islands Fisheries Science Center, National Marine Fisheries Service, NOAA, U.S. Department of Commerce",
  "Hawaiian Archipelago"
]
landingPage https://www.fisheries.noaa.gov/inport/item/36146
language 
[]
license https://creativecommons.org/publicdomain/zero/1.0/
modified 2021-01-01T00:00:00.000+00:00
publisher 
{
  "name": "Pacific Islands Fisheries Science Center",
  "@type": "org:Organization"
}
rights otherRestrictions, unclassified
spatial -166.11682,23.627917,-178.383718,28.459215
temporal 2013-08-03T00:00:00+00:00/2013-08-23T00:00:00+00:00
theme 
[
  "geospatial"
]
title National Coral Reef Monitoring Program: Benthic Cover Derived from Analysis of Benthic Images Collected for Climate Stations across the Hawaiian Archipelago since 2013

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