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Microfluidic Extraction of DNA for Identification of Unknown organisms in Microgravity Project

Metadata Updated: December 6, 2023

<p>Expanding human spaceflight beyond low-Earth orbit poses significant technological challenges. One of these challenges is environmental monitoring, specifically the ability to identify and respond to microbiological threats in real-time. Because returning samples to Earth for analysis is not practical from deep-space, in-flight environmental monitoring is an essential capability for missions away from low-Earth orbit. Microbial identification by direct sequencing is readily achieved by identifying species-specific differences in Deoxyribonucleic Acid (DNA) sequences. These analyses require the extraction and separation of DNA from cells, but current methods for DNA isolation typically require technologies incompatible with spaceflight.</p><p>In-flight environmental monitoring is an important technology for missions away from low-Earth orbit. An important aspect of environmental monitoring is the ability to identify and respond to microbiological threats. Automatable in situ monitoring technologies are essential when sample return is not practical. Microbial identification is readily achieved by identifying differences in DNA sequences, such as direct sequencing or hybridization of the DNA strands. These analyses require the extraction and separation of DNA from cells. However, current methods for DNA isolation typically require technologies incompatible with spaceflight.</p><p>We seek to develop a miniaturized MEDIUM device for the extraction of DNA from operationally relevant samples (i.e., potable water sources); the extracted DNA can then be used for microbial identification using one or more DNA-dependent molecular techniques, such as sequencing. Isolation of DNA for sequencing or other analyses typically requires technologies incompatible with spaceflight. For this reason we have carefully chosen digital microfluidics-based extraction cartridges due to their likely compatibility with microgravity. Unlike other DNA extraction methods that rely on gravitational forces, the microfluidics devices use electro-wetting to move liquids. This eliminates the requirement for pumps, centrifuges and other moving parts. The quality of the DNA extracted by the microfluidics-based platform and by conventional kit-based methods will be characterized for its suitability in next-generation sequencing applications.</p>

Access & Use Information

Public: This dataset is intended for public access and use. License: No license information was provided. If this work was prepared by an officer or employee of the United States government as part of that person's official duties it is considered a U.S. Government Work.

Downloads & Resources

References

http://techport.nasa.gov/home
http://techport.nasa.gov/doc/home/TechPort_Advanced_Search.pdf
http://techport.nasa.gov/fetchFile?objectId=6561
http://techport.nasa.gov/fetchFile?objectId=3456
http://techport.nasa.gov/fetchFile?objectId=3447
http://techport.nasa.gov/fetchFile?objectId=6584
http://techport.nasa.gov/fetchFile?objectId=6560
http://techport.nasa.gov/fetchFile?objectId=3448

Dates

Metadata Created Date November 12, 2020
Metadata Updated Date December 6, 2023

Metadata Source

Harvested from NASA Data.json

Additional Metadata

Resource Type Dataset
Metadata Created Date November 12, 2020
Metadata Updated Date December 6, 2023
Publisher Space Technology Mission Directorate
Maintainer
Identifier TECHPORT_13759
Data First Published 2013-12-01
Data Last Modified 2020-01-29
Public Access Level public
Bureau Code 026:00
Metadata Context https://project-open-data.cio.gov/v1.1/schema/catalog.jsonld
Metadata Catalog ID https://data.nasa.gov/data.json
Schema Version https://project-open-data.cio.gov/v1.1/schema
Catalog Describedby https://project-open-data.cio.gov/v1.1/schema/catalog.json
Harvest Object Id 104909ce-3359-4b08-9ebd-9ca3f4093071
Harvest Source Id 58f92550-7a01-4f00-b1b2-8dc953bd598f
Harvest Source Title NASA Data.json
Homepage URL http://techport.nasa.gov/view/13759
Program Code 026:000
Related Documents http://techport.nasa.gov/home, http://techport.nasa.gov/doc/home/TechPort_Advanced_Search.pdf, http://techport.nasa.gov/fetchFile?objectId=6561, http://techport.nasa.gov/fetchFile?objectId=3456, http://techport.nasa.gov/fetchFile?objectId=3447, http://techport.nasa.gov/fetchFile?objectId=6584, http://techport.nasa.gov/fetchFile?objectId=6560, http://techport.nasa.gov/fetchFile?objectId=3448
Source Datajson Identifier True
Source Hash ed40b7b2eae3510395be9ebb7dbf456435161e4d51bcfc46032c915436d9d5ef
Source Schema Version 1.1
Temporal 2013-12-01T00:00:00Z/2014-12-01T00:00:00Z

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