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Infection prevalence and viral load in pacific herring exposed to erythrocytic necrosis virus (ENV) at 3 temperatures

Metadata Updated: July 6, 2024

Viral erythrocytic necrosis (VEN) is a disease of marine and anadromous fishes, which is poorly understood, largely because its causative iridovirus, erythrocytic necrosis virus (ENV), is intractable to cell culture. Natural VEN epizootics and observations studies in wild populations suggest that temperature may be an important disease cofactor. Here, a controlled laboratory exposure study provides evidence for a direct relationship between temperature and the progression of viral erythrocytic necrosis (VEN) in Pacific herring. Waterborne exposure of Pacific herring to kidney homogenates containing ENV resulted in the establishment of infections, characterized by high infection prevalence (89%; 40/45) and mean viral loads (5.5 log10- gene copies / ug DNA) in kidney tissues at 44 d post exposure. Viral loads were higher in herring from the ambient (9.0 °C) and warm (13.5 °C) treatments (6.1 - 6.2 log10- gene copies / total DNA) than from the cool (6.9 °C) treatment (4.3 log10- gene copies / total DNA). Similarly, the peak proportion of diseased fish was directly related to temperature (P 0.001), with cytoplasmic inclusion bodies detected in 21% of herring from the cool, 52% from the ambient, and 60% from the warm treatments. The mean disease load in each fish (enumerated as the percent of erythrocytes with cytoplasmic inclusions), increased with temperature from 15% in the cool, 36% in the ambient, and 32% in the warm treatments at 44 days post exposure. Transcriptional analysis indicated that the number of differentially expressed genes among ENV-exposed herring increased with temperature, time post exposure, and viral load. Correlation network analysis of transcriptomic data showed robust activation of interferon and viral immune responses in hepatic tissue of infected individuals independent of other experimental variables.

Access & Use Information

Public: This dataset is intended for public access and use. License: No license information was provided. If this work was prepared by an officer or employee of the United States government as part of that person's official duties it is considered a U.S. Government Work.

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Dates

Metadata Created Date September 19, 2023
Metadata Updated Date July 6, 2024

Metadata Source

Harvested from DOI EDI

Additional Metadata

Resource Type Dataset
Metadata Created Date September 19, 2023
Metadata Updated Date July 6, 2024
Publisher U.S. Geological Survey
Maintainer
@Id http://datainventory.doi.gov/id/dataset/15ce5102cb37ecfc82a8dd9f25404865
Identifier USGS:649f0f56d34ef77fcb041d7c
Data Last Modified 20230908
Category geospatial
Public Access Level public
Bureau Code 010:12
Metadata Context https://project-open-data.cio.gov/v1.1/schema/catalog.jsonld
Metadata Catalog ID https://datainventory.doi.gov/data.json
Schema Version https://project-open-data.cio.gov/v1.1/schema
Catalog Describedby https://project-open-data.cio.gov/v1.1/schema/catalog.json
Harvest Object Id 62c64fe4-9582-4bca-a6bf-b399184cbc16
Harvest Source Id 52bfcc16-6e15-478f-809a-b1bc76f1aeda
Harvest Source Title DOI EDI
Metadata Type geospatial
Old Spatial -122.68954,48.09998,-122.687652,48.101671
Publisher Hierarchy White House > U.S. Department of the Interior > U.S. Geological Survey
Source Datajson Identifier True
Source Hash d1d0350c59be7f16cc9fd1b4522a2adc6893fb469fa3838d340a0f253e2c334c
Source Schema Version 1.1
Spatial {"type": "Polygon", "coordinates": -122.68954, 48.09998, -122.68954, 48.101671, -122.687652, 48.101671, -122.687652, 48.09998, -122.68954, 48.09998}

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