Imperfect SSR Finder

Metadata Updated: December 9, 2021

The Imperfect SSR Finder is an online tool to help geneticists find Simple Sequence Repeats (SSR), aka microsatellites or Short Tandem Repeats (STR), in uploaded FASTA sequences. The Imperfect SSR Finder is an interactive website to help you find imperfect (and perfect) SSRs. You can test small snippets or upload large files, change the lengths and types of the SSRs your are looking for, and create output with SSRs in inverted case and/or color highlights. A tabular information file is also created in .CSV format, for easy import into any spreadsheet program.

Access & Use Information

Public: This dataset is intended for public access and use. License: Creative Commons CCZero

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Dates

Metadata Created Date November 10, 2020
Metadata Updated Date December 9, 2021

Additional Metadata

Resource Type Dataset
Metadata Created Date November 10, 2020
Metadata Updated Date December 9, 2021
Publisher Agricultural Research Service
Unique Identifier Unknown
Maintainer
Identifier 40a0ef36-018b-4140-8b64-53b387159ac9
Data Last Modified 2021-11-30
Public Access Level public
Bureau Code 005:18
Metadata Context https://project-open-data.cio.gov/v1.1/schema/catalog.jsonld
Schema Version https://project-open-data.cio.gov/v1.1/schema
Catalog Describedby https://project-open-data.cio.gov/v1.1/schema/catalog.json
Harvest Object Id 736d8f0d-d7e5-4b34-91a7-05cb21595ede
Harvest Source Id d3fafa34-0cb9-48f1-ab1d-5b5fdc783806
Harvest Source Title USDA JSON
License https://creativecommons.org/publicdomain/zero/1.0/
Program Code 005:040
Source Datajson Identifier True
Source Hash 0acd1caf56230211caebe2d2a351eb2330a36eb9
Source Schema Version 1.1

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