Horizontal Gene Transfer of SGI-4 or a plasmid containing <i>oriT</i><sub>SGI-4</sub> to <i>Salmonella enterica</i> serovar Typhimurium
Conjugation efficiency of Salmonella Genomic Island 4 (SGI-4) from donor Salmonella enterica serovar I 4,[5],12:i:- or a plasmid containing oriTSGI-4 to recipient strain Salmonella enterica serovar Typhimurium. The oriTSGI-4 nucleotide sequences are located in the region that spans nucleotides 4704600-4706000 of the Salmonella enterica serovar I 4,[5],12:i:- strain USDA15WA-1 genome (CP040686). Conjugation efficiency was calculated by dividing the colony forming units (CFU)/mL of transconjugants by the CFU/mL of donors. A transconjugant is a bacterial recipient that received DNA from the donor strain due to horizontal gene transfer.
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HGT SGI-4 or oriTSGI-4 to Salmonella enterica serovar Typhimurium.xlsx
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Complete Metadata
| @type | dcat:Dataset |
|---|---|
| accessLevel | public |
| bureauCode |
[ "005:18" ] |
| contactPoint |
{ "fn": "Bearson, Bradley, L.", "hasEmail": "mailto:brad.bearson@usda.gov" } |
| description | <p dir="ltr">Conjugation efficiency of <i>Salmonella</i> Genomic Island 4 (SGI-4) from donor <i>Salmonella enterica</i> serovar I 4,[5],12:i:- or a plasmid containing<i> oriT</i><sub>SGI-4</sub> to recipient strain <i>Salmonella enterica</i> serovar Typhimurium<i>.</i> The <i>oriT</i><sub>SGI-4</sub> nucleotide sequences are located in the region that spans nucleotides 4704600-4706000 of the <i>Salmonella enterica</i> serovar I 4,[5],12:i:- strain USDA15WA-1 genome (<a href="https://www.ncbi.nlm.nih.gov/nuccore/CP040686" target="_blank">CP040686</a>). Conjugation efficiency was calculated by dividing the colony forming units (CFU)/mL of transconjugants by the CFU/mL of donors. A transconjugant is a bacterial recipient that received DNA from the donor strain due to horizontal gene transfer.</p> |
| distribution |
[ { "@type": "dcat:Distribution", "title": "HGT SGI-4 or oriTSGI-4 to Salmonella enterica serovar Typhimurium.xlsx", "format": "xlsx", "mediaType": "application/vnd.openxmlformats-officedocument.spreadsheetml.sheet", "downloadURL": "https://ndownloader.figshare.com/files/49432255" } ] |
| identifier | 10.15482/USDA.ADC/27115081.v1 |
| keyword |
[ "Horizontal gene transfer", "Salmonella", "Salmonella 4,[5],12:i:-", "Salmonella Genomic Island 4", "Salmonella enterica serovar I 4,[5],12:i:-", "bacterial conjugation", "integrative conjugative element", "origin of transfer (oriT)" ] |
| license | https://creativecommons.org/licenses/by/4.0/ |
| modified | 2026-05-27 |
| programCode |
[ "005:040" ] |
| publisher |
{ "name": "Agricultural Research Service", "@type": "org:Organization" } |
| temporal | 2023-10-01/2023-10-01 |
| title | Horizontal Gene Transfer of SGI-4 or a plasmid containing <i>oriT</i><sub>SGI-4</sub> to <i>Salmonella enterica</i> serovar Typhimurium |
