Genome Sequence Data Set01
The fasta files (Genome_Set01.zip) contain the reference-assisted de novo assemblies (as contigs) of three Escherichia coli isolates. The table contains rows as isolates (yellow) and columns as attributes (green) for each individual genome.
This dataset is associated with the following publication:
Gomez-Alvarez, V., and J. Hoelle-Schwalbach. Draft Genome Sequences of Antibiotic-Resistant Escherichia coli Isolates from U.S. Wastewater Treatment Plants. Microbiology Resource Announcements. American Society for Microbiology, Washington, DC, USA, 8(23): e00351-19, (2019).
Resources
3 resources available
-
https://www.ncbi.nlm.nih.gov/bioproject/?term=PRJNA524695
FILE -
Genome_Set01.xlsx
APPLICATION/VND.OPENXMLFORMATS-OFFICEDOCUMENT.SPREADSHEETML.SHEET -
Genome_Set01.zip
APPLICATION/X-ZIP-COMPRESSED
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Complete Metadata
| @type | dcat:Dataset |
|---|---|
| accessLevel | public |
| bureauCode |
[
"020:00"
]
|
| contactPoint |
{
"fn": "Jill Hoelle-Schwalbach",
"hasEmail": "mailto:hoelle.jill@epa.gov"
}
|
| description | The fasta files (Genome_Set01.zip) contain the reference-assisted de novo assemblies (as contigs) of three Escherichia coli isolates. The table contains rows as isolates (yellow) and columns as attributes (green) for each individual genome. This dataset is associated with the following publication: Gomez-Alvarez, V., and J. Hoelle-Schwalbach. Draft Genome Sequences of Antibiotic-Resistant Escherichia coli Isolates from U.S. Wastewater Treatment Plants. Microbiology Resource Announcements. American Society for Microbiology, Washington, DC, USA, 8(23): e00351-19, (2019). |
| distribution |
[
{
"title": "https://www.ncbi.nlm.nih.gov/bioproject/?term=PRJNA524695",
"accessURL": "https://www.ncbi.nlm.nih.gov/bioproject/?term=PRJNA524695"
},
{
"title": "Genome_Set01.xlsx",
"mediaType": "application/vnd.openxmlformats-officedocument.spreadsheetml.sheet",
"downloadURL": "https://pasteur.epa.gov/uploads/10.23719/1503434/Genome_Set01.xlsx"
},
{
"title": "Genome_Set01.zip",
"mediaType": "application/x-zip-compressed",
"downloadURL": "https://pasteur.epa.gov/uploads/10.23719/1503434/Genome_Set01.zip"
}
]
|
| identifier | https://doi.org/10.23719/1503434 |
| keyword |
[
"Phylotyping",
"assembly",
"carbapenem-resistant E. coli",
"carbapenemase and extended spectrum beta lactamase genes",
"draft genome",
"isolates",
"wastewater treatment"
]
|
| license | https://pasteur.epa.gov/license/sciencehub-license.html |
| modified | 2019-03-04 |
| programCode |
[
"020:096"
]
|
| publisher |
{
"name": "U.S. EPA Office of Research and Development (ORD)",
"subOrganizationOf": {
"name": "U.S. Environmental Protection Agency",
"subOrganizationOf": {
"name": "U.S. Government"
}
}
}
|
| references |
[
"https://doi.org/10.1128/mra.00351-19"
]
|
| rights |
null
|
| title | Genome Sequence Data Set01 |
