Genome comparisons between native and non-native Phragmites australis
This dataset describes independent chromosome-scale genome assemblies forinvasive P. australis ssp. australis and co-occurring native ssp. americanus. Comparative genomic and transcriptomic analyses were used to identify lineage-specific innovations associated with invasive success. Beyond Phragmites, comparative analyses across multiple grass genomes, including eight invasive species with related non-invasive species, revealed repeated expansion of gene families associated with abiotic stress tolerance and developmental regulation, suggesting convergent adaptive strategies in the grass family for invasive success.
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Complete Metadata
| accessLevel | public |
|---|---|
| bureauCode |
[ "010:12" ] |
| contactPoint |
{ "fn": "Wesley A Bickford", "@type": "vcard:Contact", "hasEmail": "mailto:wbickford@usgs.gov" } |
| description | This dataset describes independent chromosome-scale genome assemblies forinvasive P. australis ssp. australis and co-occurring native ssp. americanus. Comparative genomic and transcriptomic analyses were used to identify lineage-specific innovations associated with invasive success. Beyond Phragmites, comparative analyses across multiple grass genomes, including eight invasive species with related non-invasive species, revealed repeated expansion of gene families associated with abiotic stress tolerance and developmental regulation, suggesting convergent adaptive strategies in the grass family for invasive success. |
| distribution |
[ { "@type": "dcat:Distribution", "title": "Digital Data", "format": "XML", "accessURL": "https://doi.org/10.5066/P13TOX3J", "mediaType": "application/http", "description": "Landing page for access to the data" }, { "@type": "dcat:Distribution", "title": "Original Metadata", "format": "XML", "mediaType": "text/xml", "description": "The metadata original format", "downloadURL": "https://data.usgs.gov/datacatalog/metadata/USGS.69f0a775b66b012258d9d591.xml" } ] |
| identifier | http://datainventory.doi.gov/id/dataset/USGS_69f0a775b66b012258d9d591 |
| keyword |
[ "Ann Arbor, Michigan", "Chelsea, Michigan", "DNA sequencing", "Michigan", "Ohio", "Ottawa National Wildlife Refuge", "Sandusky State Game Area", "USGS:69f0a775b66b012258d9d591", "biota", "invasive species", "vascular plants" ] |
| modified | 2026-09-16T00:00:00Z |
| publisher |
{ "name": "U.S. Geological Survey", "@type": "org:Organization" } |
| spatial | -84.1333, 41.6032, -83.1256, 43.4255 |
| theme |
[ "geospatial" ] |
| title | Genome comparisons between native and non-native Phragmites australis |
