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Genetic detection of Lake Sinai Virus in honey bees (Apis mellifera) and other insects

Metadata Updated: September 1, 2023

Lake Sinai Viruses (LSV) are common ribonucleic acid (RNA) viruses of honey bees (Apis mellifera) that frequently reach high abundance but are not linked to overt disease. LSVs are genetically heterogeneous and collectively widespread, but despite frequent detection in surveys, the ecological and geographic factors structuring their distribution in A. mellifera are not understood. Even less is known about their distribution in other species. Better understanding of LSV prevalence and ecology have been hampered by high sequence diversity within the LSV clade.We developed a new genetic assay that detects all currently known lineages. We also performed pilot metagenetic sequencing to quantify the diversity of LSV sequences. The resulting data are summarized herein.

Access & Use Information

Public: This dataset is intended for public access and use. License: No license information was provided. If this work was prepared by an officer or employee of the United States government as part of that person's official duties it is considered a U.S. Government Work.

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Dates

Metadata Created Date June 1, 2023
Metadata Updated Date September 1, 2023

Metadata Source

Harvested from DOI EDI

Additional Metadata

Resource Type Dataset
Metadata Created Date June 1, 2023
Metadata Updated Date September 1, 2023
Publisher U.S. Geological Survey
Maintainer
Identifier USGS:5ee1064882ce3bd58d7be6ef
Data Last Modified 20220714
Category geospatial
Public Access Level public
Bureau Code 010:12
Metadata Context https://project-open-data.cio.gov/v1.1/schema/catalog.jsonld
Metadata Catalog ID http://www.agency.gov/data.json
Schema Version https://project-open-data.cio.gov/v1.1/schema
Catalog Describedby https://project-open-data.cio.gov/v1.1/schema/catalog.json
Harvest Object Id 8e45fb28-5fd8-43ac-a8d7-de4d07c452fa
Harvest Source Id 52bfcc16-6e15-478f-809a-b1bc76f1aeda
Harvest Source Title DOI EDI
Metadata Type geospatial
Old Spatial -126.5625,31.9522,-67.8516,45.5833
Publisher Hierarchy White House > U.S. Department of the Interior > U.S. Geological Survey
Source Datajson Identifier True
Source Hash cf16a4f2b1f968b6bc45d45e1e5e18c65e77d4d4571b9fabb6618242ffdf15fe
Source Schema Version 1.1
Spatial {"type": "Polygon", "coordinates": -126.5625, 31.9522, -126.5625, 45.5833, -67.8516, 45.5833, -67.8516, 31.9522, -126.5625, 31.9522}

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