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Development, validation and integration of in silico models to identify androgen active chemicals

Metadata Updated: September 1, 2021

A diverse data set of 1667 chemicals with AR experimental activity were provided by the U.S. EPA from the oxicity Forecaster (ToxCast) program which generates data using in vitro high-throughput screening (HTS) assays measuring activity of chemicals at multiple points along the androgen receptor (AR) activity pathway. The Endocrine Disruptor Knowledgebase (EDKB) androgen receptor (AR) binding data set (Fang et al., 2003) was downloaded from the FDA website and was produced expressly as a training set designed for developing predictive models. The data is based on a validated assay using recombinant AR. The dataset contains 146 AR binders and 56 non-AR binders. These training set chemicals were selected for both chemical structure diversity and range of activity, both of which are essential to develop robust QSAR and other models (Perkins, 2003).

This dataset is associated with the following publication: Manganelli, S., A. Roncaglioni, K. Mansouri, R. Judson, E. Benfenati, A. Manganaro, and P. Ruiz. Development, validation and integration of in silico models to identify androgen active chemicals. CHEMOSPHERE. Elsevier Science Ltd, New York, NY, USA, 220: 204-215, (2019).

Access & Use Information

Public: This dataset is intended for public access and use. License: See this page for license information.

Downloads & Resources

References

https://doi.org/10.1016/j.chemosphere.2018.12.131

Dates

Metadata Created Date November 12, 2020
Metadata Updated Date September 1, 2021

Metadata Source

Harvested from EPA ScienceHub

Additional Metadata

Resource Type Dataset
Metadata Created Date November 12, 2020
Metadata Updated Date September 1, 2021
Publisher U.S. EPA Office of Research and Development (ORD)
Maintainer
Identifier https://doi.org/10.23719/1503185
Data Last Modified 2019-05-06
Public Access Level public
Bureau Code 020:00
Schema Version https://project-open-data.cio.gov/v1.1/schema
Harvest Object Id 061a8390-d8f9-45d7-905f-4d124f465ef0
Harvest Source Id 04b59eaf-ae53-4066-93db-80f2ed0df446
Harvest Source Title EPA ScienceHub
License https://pasteur.epa.gov/license/sciencehub-license.html
Program Code 020:095
Publisher Hierarchy U.S. Government > U.S. Environmental Protection Agency > U.S. EPA Office of Research and Development (ORD)
Related Documents https://doi.org/10.1016/j.chemosphere.2018.12.131
Source Datajson Identifier True
Source Hash 0b82a604db68f983c6a919b84ffdf4ed842ca0a1
Source Schema Version 1.1

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