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Data from: Development and evaluation of a rearing protocol for laboratory assays utilizing the blue orchard bee (<i>Osmia lignaria</i> Say, Hymenoptera: Megachilidae)

Metadata Updated: December 2, 2025

The blue orchard bee (Osmia lignaria Say, Hymenoptera: Megachilidae) is a native solitary bee in North America. This pollinator species is crucial for orchard pollination, primarily apples, almonds, and cherries. Osmia lignaria is an increasingly managed commercial species sold to supplement honey bee pollination services or used alone. Consistent protocols to rear O. lignaria and other above-ground nesting solitary bee species are lacking. This makes comparisons to social species, such as honey bees and bumble bees, difficult, and data comparisons between solitary bee species are incompatible.We collected data from two study years, comprising three studies, where we followed O. lignaria’s development from grafting of eggs or first instars in the summer to adult emergence the following spring. The data presented were control bees that were fed sterilized sham inoculate treatments in a larger pathogen-pesticide study.Adult O. lignaria were first released into an apple orchard in Logan, Utah, USA, where they were allowed to pollinate and mate, and females created nests with provisioned offspring. We then took completed nests to the laboratory, where they were opened to obtain O. lignaria-collected provisions (pollen+nectar) and eggs/first instars. We retained these provisions and eggs/first instars in our rearing studies and to evaluate our protocol methods. We then grafted eggs/first instars onto homogenized provisions on a graft date inside 3-D printed well plates. 3-D printed well plates were desired for our protocol to provide enough space to allow O. lignaria to complete their life cycle to adult emergence the following spring.Our research proves that O. lignaria can be reared in 3-D-printed well plates and emerge as adults the following spring. This can allow researchers to evaluate the chronic effects of pathogen and/or pesticide exposure on immature solitary bees. Alterations to the protocol, including different kinds of treatment types, can allow researchers to evaluate synergisms, antagonisms, or additive effects that may influence the survival, development, or weight metrics of O. lignaria. The protocol is replicable and could be adapted for other above-ground nesting solitary bee species.Our O. lignaria rearing protocol is provided in full detail at: dx.doi.org/10.17504/protocols.io.eq2lyj4qplx9/v2Key findings include: (1) Determination of development in fine detail and near-exact dates for individual developing O. lignaria inside 3-D printed well plates, (2) a 3-D print file that can be altered for other species if desired, (3) Number of days between life stages and the total number of days to each life stage, (4) Life status at various immature and mature life stages, (5) Sex determination for bees that reached adulthood (male or female), (6) Final life stage reached (larva, prepupa, pupa, or live/dead adult), (7) Suggested weight metrics evaluate for O. lignaria, and (8) Different winter diapause durations may produce variable emergence and weight loss results from year-to-year or study-to-study.Additional variables in the dataset include: (1) Study year, (2) Study name, (3) Sample identifier), (4) Provision batch, (5) Graft date, and (6) Various dates that reflect temperature and relative humidity (RH) durations.Abbreviations and acronyms in the “RAWdata” datasetYear = year data was collectedStudy_name = name of study data was collectedSample_ID = sample identifier (one for each individual bee, some IDs may be replicated for both years depending on plate replicate or position replicate)Provision_batch = homogenized O. lignaria-collected provisions provided to eggs and/or first instars on a given graft dateGraft = date eggs and/or first instars were grafted onto homogenized provisions (provision batch)First = date first instar was observedSecond = date second instar was observedFifth = date fifth instar was observedCocoon_initiation = date first signs of silk were observedCocoon_completion = date cocoon was determined to completePupation = date pupation was observed, determined using X-ray imagingAdult_molt = date adult molt was observed, determined using X-ray imagingArbitrary_Adult_molt = arbitrary adult molt date for bees where adult molt may not have been easily identifiable (+30 days since pupation date)Ramp_down = date bees were placed into temperature+RH ramp-down conditionsWinter_diapause = date bees were placed in winter diapause conditionsArbitrary_Adult_death = arbitrary adult death date provided for adults that died before emergence conditions and did not emerge successfully the following springRamp_up = date bees were placed into temperature+RH ramp-up conditionsEmergence_inc_start = date emergence incubation beganEmergence = date emergence was observed (adults completely chewed out of cocoons)Date_pulled = date bees were pulled from the experiment and frozen at -80℃Graft_First = number of days between graft and first instarFirst_Second = number of days between first instar and second instarSecond_Fifth = number of days between second instar and fifth instarFifth_Cinitiation = number of days between fifth instar and cocoon initiationCinitiation_Ccompletion = number of days between cocoon initiation and cocoon completionCcompletion_Pupation = number of days between cocoon completion and pupationPupation_Adult = number of days between pupation and adult moltAdult_ArbitraryDeath = number of days between adult molt and an arbitrarily assigned death date for adultsArbitraryDeath_Emergence = number of days between an arbitrarily assigned death date for adults and emergenceAdult_Emergence = number of days between adult molt and emergenceSecond_Pupation = number of days between second instar and pupationSecond_Emergence = number of days between second instar and emergenceTotal_Dev_Second = total number of days from graft to second instarTotal_Dev_Fifth = total number of days from graft to fifth instarTotal_Dev_Cinitiation = total number of days from graft to cocoon initiationTotal_Dev_Ccompletion = total number of days from graft to cocoon completionTotal_Dev_Pupation = total number of days from graft to pupationTotal_Dev_Adult = total number of days from graft to adult moltTotal_Dev_Emergence = total number of days from graft to emergenceTotal_Dev_Second_Pupation = total number of days from second instar to pupationTotal_Dev_Second_Emergence = total number of days from second instar to emergenceAlive_Dead_First = were bees alive or dead at the first instar stage?Alive_Dead_Second = were bees alive or dead at the second instar stage?Alive_Dead_Fifth = were bees alive or dead at the fifth instar stage?Alive_Dead_Cinitiation = were bees alive or dead at cocoon initiation?Alive_Dead_Ccompletion = were bees alive or dead at cocoon completion?Alive_Dead_Pupation = were bees alive or dead at pupation?Alive_Dead_Adult = were bees alive or dead at the adult molt stage?Alive_Dead_Emergence = were bees alive or dead at emergence?Status_First = 0 means bees were alive at the first instar stage and 1 means they were dead (used in survival analyses)Status_Second = 0 means bees were alive at the second instar stage and 1 means they were dead (used in survival analyses)Status_Fifth = 0 means bees were alive at the fifth instar stage and 1 means they were dead (used in survival analyses)Status_Cinitiation = 0 means bees were alive at cocoon initiation and 1 means they were dead (used in survival analyses)Status_Ccompletion Status_Pupation = 0 means bees were alive at pupation and 1 means they were dead (used in survival analyses)Status_Adult Status_Emergence = 0 means bees were alive at emergence and 1 means they were dead (used in survival analyses)Pre_diapause_weight = weight in milligrams obtained for adults in cocoons before being placed into winter diapause (only live adults at the end of emergence are provided weights)Post_diapause_weight = weight in milligrams obtained for adults in cocoons after winter diapause (only live adults at the end of emergence are provided weights)Percent_weight_loss_X100 = weight loss calculated for each adult (only live adults at the end of emergence are provided weight loss calculations); calculated as post-diapause weight subtracted from pre-diapause weight divided by pre-diapause weight then multiplied by 100 to obtain a percentage (%) of weight lossSex = sex determined for bees that reached the adult stage (female or male)Final_life_stage = final life stage recorded for each beeInstar = if the bee’s final life stage was a larval stage, which larval stage was the final one recorded?Required_more_time = did adults require more time than the allowed emergence period to emerge successfully? (adults that were still alive when cut out of cocoons, they were considered live adults but not included in emergence analyses)Final_life_stage_2 = life stage for adults further categorized as live or deadSex_2 = males and females further categorized into live or deadAbbreviations and acronyms in the "Death_graft" dataset: The number of samples per year and study that did not survive past the first instar stage. The second instar stage was used to standardize survival and development since they begin to feed on provisions. Eggs and first instars were used as the initial grafting life stage because they are non-feeding stages of O. lignaria; therefore, they should be excluded from analyses unless desired.Year = year data was collectedStudy_name = name of study data was collectedSample_ID = sample identifier (one for each individual bee, some IDs may be replicated for both years depending on plate replicate or position replicate)Provision_batch = homogenized O. lignaria-collected provisions provided to eggs and/or first instars on a given graft dateGraft = date eggs and/or first instars were grafted onto homogenized provisions (provision batch)First = date first instar was observedDeath_graft = did sample experience death due to grafting? (likely via mechanical injury)Graft_First = number of days between graft and first instarFinal_life_stage = final life stage recorded for each bee, for all these samples the final life stage reached was larvaInstar = if the bee’s final life stage was a larval stage, which larval stage was the final one recorded? For all these samples, the final instar reached was first

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Public: This dataset is intended for public access and use. License: Creative Commons Attribution

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Dates

Metadata Created Date January 1, 2025
Metadata Updated Date December 2, 2025

Metadata Source

Harvested from USDA JSON

Additional Metadata

Resource Type Dataset
Metadata Created Date January 1, 2025
Metadata Updated Date December 2, 2025
Publisher Agricultural Research Service
Maintainer
Identifier 10.15482/USDA.ADC/27898743.v1
Data Last Modified 2025-11-21
Public Access Level public
Bureau Code 005:18
Metadata Context https://project-open-data.cio.gov/v1.1/schema/catalog.jsonld
Schema Version https://project-open-data.cio.gov/v1.1/schema
Catalog Describedby https://project-open-data.cio.gov/v1.1/schema/catalog.json
Harvest Object Id be4bc2da-600a-4f28-93bf-4c849d158558
Harvest Source Id d3fafa34-0cb9-48f1-ab1d-5b5fdc783806
Harvest Source Title USDA JSON
License https://creativecommons.org/licenses/by/4.0/
Old Spatial {"type": "MultiPoint", "coordinates": -111.807425, 41.7254528, -111.8123694, 41.7580944, -111.83439, 41.73549}
Program Code 005:040
Source Datajson Identifier True
Source Hash d8b80d5716604e52b22d00b138f48765ef8f36b955d2d312151d39126688ac82
Source Schema Version 1.1
Spatial {"type": "MultiPoint", "coordinates": -111.807425, 41.7254528, -111.8123694, 41.7580944, -111.83439, 41.73549}
Temporal 2021-05-08/2023-03-16

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