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    • Assessing residential activity in a home plumbing system simulator: monitoring the occurrence and relationship of major opportunistic pathogens and phagocytic amoebas (FM)

    Metadata Updated: November 16, 2023

    The raw sequence reads have been submitted to the NCBI Sequence Read Archive (SRA) under the BioProject PRJNA961987 with the following BioSample numbers: SAMN34376234, SAMN34376235, SAMN34376236, SAMN34376237, SAMN34376238, SAMN34376239, SAMN34376240, SAMN34376241, SAMN34376242, SAMN34376243, SAMN34376244, SAMN34376245, SAMN34376246, SAMN34376247, SAMN34376248, SAMN34376249, SAMN34376250, SAMN34376251, SAMN34376252, SAMN34376253, SAMN34376254, SAMN34376255, and SAMN34376256.

    An abundance matrix (Table_taxonomy.xlsx) contains rows as taxonomic lineage, columns as samples, and entries representing the abundance of each lineage as a number of reads and percentage of all reads obtained for each individual location and residential activity.

    A table (Table_water_quality_parameters.xlsx) contains rows as residential activity with date sampled, columns as Temp (°C), Free Chlorine (Cl2/L), pH, L. pneumophila, M. intracellulare, P. aeruginosa, and V. vermiformis for each HPS section.

    This dataset is associated with the following publication: Gomez-Alvarez, V., H. Ryu, M. Tang, M. McNeely, C. Muhlen, M. Urbanic, D. Williams, D. Lytle, and L. Boczek. Assessing residential activity in a home plumbing system simulator: monitoring the occurrence and relationship of major opportunistic pathogens and phagocytic amoebas. Frontiers in Microbiology. Frontiers, Lausanne, SWITZERLAND, 14: 1260460, (2023).

    Access & Use Information

    Public: This dataset is intended for public access and use. License: See this page for license information.

    Downloads & Resources

    References

    https://doi.org/10.3389/fmicb.2023.1260460
    https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10616306

    Dates

    Metadata Created Date November 16, 2023
    Metadata Updated Date November 16, 2023

    Metadata Source

    Harvested from EPA ScienceHub

    Other Data Resources

    Additional Metadata

    Resource Type Dataset
    Metadata Created Date November 16, 2023
    Metadata Updated Date November 16, 2023
    Publisher U.S. EPA Office of Research and Development (ORD)
    Maintainer
    Identifier https://doi.org/10.23719/1529129
    Data Last Modified 2023-05-04
    Public Access Level public
    Bureau Code 020:00
    Schema Version https://project-open-data.cio.gov/v1.1/schema
    Harvest Object Id ebc039a1-3737-4efe-b6f0-ab0cd6d5d7e5
    Harvest Source Id 04b59eaf-ae53-4066-93db-80f2ed0df446
    Harvest Source Title EPA ScienceHub
    License https://pasteur.epa.gov/license/sciencehub-license.html
    Program Code 020:000
    Publisher Hierarchy U.S. Government > U.S. Environmental Protection Agency > U.S. EPA Office of Research and Development (ORD)
    Related Documents https://doi.org/10.3389/fmicb.2023.1260460, https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10616306
    Source Datajson Identifier True
    Source Hash 2ea18ac05234cfa3f9ddf88725762b03dd7af72408b2d8a4d96a29198122648d
    Source Schema Version 1.1

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