23 datasets found
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Federal
Conserved Domain Search Service (CD Search)
U.S. Department of Health & Human Services —
Identifies the conserved domains present in a protein sequence. CD-Search uses RPS-BLAST (Reverse Position-Specific BLAST) to compare a query sequence against... -
Federal
FASTA BLAST Databases
U.S. Department of Health & Human Services —
Sequence databases in FASTA format for use with the stand-alone BLAST programs. These databases must be formatted using formatdb before they can be used with BLAST. -
Federal
PSSM Viewer
U.S. Department of Health & Human Services —
Users can display, sort, subset and download position-specific score matrices (PSSMs) either from CDD records or from Position Specific Iterated (PSI)-BLAST protein... -
Federal
NCBI Help Manual
U.S. Department of Health & Human Services —
Accessed through the NCBI Bookshelf, the Help Manual contains documentation for many NCBI resources, including PubMed, PubMed Central, the Entrez system, Gene, SNP... -
Federal
Third Party Annotation (TPA) Database
U.S. Department of Health & Human Services —
A database that contains sequences built from the existing primary sequence data in GenBank. The sequences and corresponding annotations are experimentally supported... -
Federal
Entrez Programming Utilities
U.S. Department of Health & Human Services —
The Entrez Programming Utilities (E-utilities) are a set of eight server-side programs that provide a stable interface into the Entrez query and database system at... -
Federal
Conserved Domain Database (CDD)
U.S. Department of Health & Human Services —
CDD is a protein annotation resource that consists of a collection of well-annotated multiple sequence alignment models for ancient domains and full-length proteins. -
Federal
Whole Genome Shotgun Submissions
U.S. Department of Health & Human Services —
Whole Genome Shotgun (WGS) projects are genome assemblies of incomplete genomes or incomplete chromosomes of prokaryotes or eukaryotes that are generally being... -
Federal
NCBI Learn
U.S. Department of Health & Human Services —
NCBI creates a variety of educational products including courses, workshops, webinars, training materials and documentation. NCBI educational events are free and open... -
Federal
UniGene archived data (Retired July 2019)
U.S. Department of Health & Human Services —
An automated analytical system for producing organized views of the transcriptome from a growing number of organisms. UniGene was retired in July 2019; however, you... -
Federal
Genetic Relationship and Fingerprinting (GRAF)
U.S. Department of Health & Human Services —
Genetic Relationship and Fingerprinting (GRAF) is a rapid statistical method to detect duplicates and closely related samples in large genomic datasets to be used as... -
Federal
RefSeq: NCBI Reference Sequence Database
U.S. Department of Health & Human Services —
A comprehensive, integrated, non-redundant, well-annotated set of reference sequences including genomic, transcript, and protein. -
Federal
Basic Local Alignment Search Tool (BLAST)
U.S. Department of Health & Human Services —
BLAST finds regions of similarity between biological sequences. The program compares nucleotide or protein sequences to sequence databases and calculates the... -
Federal
Structure - Molecular Modeling Database (MMDB)
U.S. Department of Health & Human Services —
Three dimensional structures provide a wealth of information on the biological function and the evolutionary history of macromolecules. They can be used to examine... -
Federal
NCBI C++ Toolkit Book
U.S. Department of Health & Human Services —
Provides an overview of the C++ language with a focus on its use in accessing resources of the National Center for Biotechnology Information at the National Library...
23 datasets found