Skip to main content
U.S. flag

An official website of the United States government

Official websites use .gov
A .gov website belongs to an official government organization in the United States.

Secure .gov websites use HTTPS
A lock ( ) or https:// means you’ve safely connected to the .gov website. Share sensitive information only on official, secure websites.

Skip to content

Try the next-generation Data Catalog at catalog-beta.data.gov and help shape it with your feedback.

71 datasets found
  • Federal

    Database of Short Genetic Variations (dbSNP)

    U.S. Department of Health & Human Services —

    Database of Short Genetic Variations (dbSNP) contains human single nucleotide variations, microsatellites, and small-scale insertions and deletions along with...
  • Federal

    GEO (Gene Expression Omnibus)

    U.S. Department of Health & Human Services —

    GEO (Gene Expression Omnibus) is a public functional genomics data repository supporting MIAME-compliant data submissions. There are also tools provided to help users...
  • Federal

    ClinVar

    U.S. Department of Health & Human Services —

    ClinVar aggregates information about genomic variation and its relationship to human health.
  • Federal

    NCBI Virus

    U.S. Department of Health & Human Services —

    NCBI Virus is an integrative, value-added resource designed to support retrieval, display and analysis of a curated collection of virus sequences and large sequence...
  • Federal

    MedGen

    U.S. Department of Health & Human Services —

    MedGen is NCBI's portal to information about conditions and phenotypes related to Medical Genetics. Terms from the NIH Genetic Testing Registry (GTR), UMLS, HPO,...
  • Federal

    Database of Genotype and Phenotype (dbGaP)

    U.S. Department of Health & Human Services —

    Database of Genotype and Phenotype (dbGaP) was developed to archive and distribute the data and results from studies that have investigated the interaction of...
  • Federal

    Transcriptome Shotgun Assembly (TSA) Sequence Database and Submissions

    U.S. Department of Health & Human Services —

    TSA is an archive of computationally assembled transcript sequences from primary data such as ESTs and Next Generation Sequencing Technologies. The overlapping...
  • Federal

    BioProject

    U.S. Department of Health & Human Services —

    The BioProject database links to data that have been or will be deposited into archival databases maintained at members of the International Nucleotide Sequence...
  • Federal

    OSIRIS

    U.S. Department of Health & Human Services —

    A public domain quality assurance software package that facilitates the assessment of multiplex short tandem repeat (STR) DNA profiles based on laboratory-specific...
  • Federal

    MaizeGDB

    Department of Agriculture —

    MaizeGDB is a community-oriented, long-term, federally funded informatics service to researchers focused on the crop plant and model organism Zea mays. Genomic,...
  • Federal

    OMIM (Online Mendelian Inheritance in Man)

    U.S. Department of Health & Human Services —

    Comprehensive, authoritative, and timely compendium of human genes and genetic phenotypes.
  • Federal

    Sequence Read Archive (SRA)

    U.S. Department of Health & Human Services —

    The Sequence Read Archive (SRA) stores sequencing data from the next generation of sequencing platforms including Roche 454 GS System®, Illumina Genome Analyzer®,...
  • Federal

    Genetic Testing Registry (GTR)

    U.S. Department of Health & Human Services —

    Genetic Testing Registry (GTR) is a free, centralized voluntary registry of comprehensive genetic test information covering clinical and research tests for Mendelian...
  • Federal

    NCBI Datasets

    U.S. Department of Health & Human Services —

    NCBI Datasets is one-stop shop for finding, browsing, and downloading genomic data. Find and download taxonomy, genome, gene, transcript, protein data, including...
  • Federal

    Data from: Construction of a High-Density American Cranberry (Vaccinium macrocarpon Ait.) Composite Map Using Genotyping-by-Sequencing for Multi-pedigree Linkage Mapping

    Department of Agriculture —

    The American cranberry (Vaccinium macrocarpon Ait.) is a recently domesticated, economically important, fruit crop with limited molecular resources. New genetic...
  • Federal

    Consensus CDS (CCDS)

    U.S. Department of Health & Human Services —

    The Consensus CDS (CCDS) project is a collaborative effort to identify a core set of human and mouse protein coding regions that are consistently annotated and of...
  • Federal

    Gramene

    Department of Agriculture —

    Gramene is a curated, open-source, integrated data resource for comparative functional genomics in crops and model plant species. Resources in this dataset:Resource...
  • Federal

    SPDI Variation Service

    U.S. Department of Health & Human Services —

    This genetic variation services interconvert and transform short genetic variants between HGVS expressions, VCF format, and the new SPDI (Sequence Position Deletion...
  • Federal

    SoyBase and the Soybean Breeder's Toolbox

    Department of Agriculture —

    SoyBase is a repository for genetics, genomics and related data resources for soybean. It contains current genetic, physical and genomic sequence maps integrated with...
  • Federal

    Data from: A First Look at the Ability to Use Genomic Prediction for Improving Ratooning Ability of Sugarcane

    Department of Agriculture —

    The filtered VCF file of 10501 SNPs from the 432 individuals in this study. This dataset was used for genome-wide association study (GWAS) and genomic prediction of...
71 datasets found

You can also access this registry using the API (see API Docs).

Didn't find what you're looking for? Suggest a dataset here.