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#1 Federal

Data from: Use of long-read sequencing simulators to assess real-world applications for food safety

Organization: Department of Agriculture
Dataset Last Updated: November 21, 2025

Shiga toxin-producing Escherichia coli (STEC) and Listeria monocytogenes are responsible for severe foodborne illnesses in the United States. Current identification methods require at least four...

Search relevance: 1.00 | Views last month: 10 | Catalog Last Checked: May 05, 2026 at 11:42 PM

#2 Federal

Long-read sequencing data from pure cultures of Escherichia coli O157:H7 and ground beef inoculated with E. coli O157:H7

Organization: Department of Agriculture
Dataset Last Updated: March 21, 2024

Foodborne pathogens are a significant cause of illness and infection with Shiga toxin-producing Escherichia coli (STEC) has the potential to produce life-threatening complications. The current...

Search relevance: 1.00 | Views last month: 3 | Catalog Last Checked: May 05, 2026 at 11:39 PM

#3 Federal

Data from: Detection of live Shiga toxin-producing Escherichia coli with long-read sequencing

Organization: Department of Agriculture
Dataset Last Updated: June 30, 2025

A requirement of any foodborne pathogen testing method is that it only detects live bacteria. Ethidium monoazide (EMA) and propidium monoazide (PMA) are dyes that penetrate the membranes of dead...

Search relevance: 1.00 | Views last month: 1 | Catalog Last Checked: May 05, 2026 at 11:39 PM

#4 Federal

Data from: Enumeration and genomic confirmation of viable Shiga-toxin-producing Escherichia coli from ground beef by integrating serial plating with long-read sequencing

Organization: Department of Agriculture
Dataset Last Updated: June 01, 2026

Consumption of food contaminated with Shiga toxin-producing Escherichia coli (STEC) causes millions of illnesses in the United States annually. Long-read sequencing could be used to reduce the...

Search relevance: 1.00 | Views last month: 0 | Catalog Last Checked: June 12, 2026 at 11:17 PM

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Data from: Use of long-read sequencing simulators to assess real-world applications for food safety

Long-read sequencing data from pure cultures of <i>Escherichia coli</i> O157:H7 and ground beef inoculated with <i>E. coli</i> O157:H7

Data from: Detection of live Shiga toxin-producing Escherichia coli with long-read sequencing

Data from: Enumeration and genomic confirmation of viable Shiga-toxin-producing <i>Escherichia coli </i>from ground beef by integrating serial plating with long-read sequencing